Oryzias melastigma (Indian medaka): 112156190
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Entry
112156190 CDS
T07439
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112156190 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112156190 (poln)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112156190 (poln)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
112156190 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
112156190
NCBI-ProteinID:
XP_036072484
Ensembl:
ENSOMEG00000015754
LinkDB
All DBs
Position
LG18:17185495..17233778
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AA seq
1149 aa
AA seq
DB search
MTSQSSSSRQRPDTSLPSQTSSCPSICLGSSLQRHTAQTLTHYQLSQTLSSYLPSQSPLF
SQQRTLESEASICGKERSPFCHQGGDLQSMRNIMEPSFTFDEIRRSDKKGHTIEETDIPG
ASFSPTKWKRSNPGEEAAPRTEEVHFQMSESEAFELESTILNVREAEERNHTELESGSSH
VQLECYPKRQSVGGESENLAVLSSELRVESGQIQSSDIQLPTKGCKKNYEELQPTETETG
KTKPDRDVQPSCYEQRSHSAEVSDGDRWLMPALSQVCGTEPSACRAPRLLDNQQHHANEQ
SSNGSSRESTSSVMLNSSDTIAAGQNLSSVHEGTLAVPAEKLEDQSLHSSQSQSYHLSFP
SSLLLKRKCDVSQQQHGVPPLKMYRPRFPPKLESFFPMSAEFVPPKTAFVQSSHCTELPP
TQTQHYFGIFQDRCRETEKDACKQTPLYKPCKRKCSIGPPASSLKALPEAVGGIDLQSRF
KNDCLPSTLASESKVTDLGKLNPEERMHILQKAKQSEVLVLTMWYQDGTTQLDPEPKLAS
PVCGLLILMKSESHCGTPEDSLGLNDRLVYLSLKHKHLWVQDQRNHNEEQFTRDLLLQVL
SRSSLAVCYKAKDLLRTVLQVYKEDISWKQVSGCQIQDPQVSGWLLDPADQAACYQDLLF
KHCRRTCTTQSLVPKKVSQIISDLCWLHKLHMILCSKLESQGLWKLYSDVELRMIPVLAA
MESHCIYVDKETLKKMSDLLGTKIKQLEQEAHQAAGQKFLVTSSSQLRTVLFEKLRLHEH
CENKKLPKTINKQQSTSEAALLQLQDLHPLPKIILEYRQVHKIKSTFVDGILSCMKTKNY
ISSTWCQTSAVTGRISAKHPNFQALPRQPLQISKKLFIHGGEEEVVTVHPRAMFVPQKGW
TFLAADFCQVELRLLAHFSSDSELLRLFTIPQADVFTLLAAQWKGLSMEDVSSEDREHAK
RIIYSVIYGAGRERLSGILGVSAEQAHQFQDRFLQTYRDVQTFIQRTIQQSHKQGYVLSI
MGRRRNLPNINSPDWGVRMQSERQAVNFVVQGSAADLCKMAMIRIFNLVSTSSSLTARLV
AQIHDELLYEVEDSQLQQFAALVKNTMESLQHIDHLGVHLKVPLKVAVSSGKSWGSMSEF
SMPLMPPSS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcagagctcctcctcccgtcaaagaccagacacctccttaccctcccagacc
tcctcctgtccgtccatctgcctgggttcctccctgcaaaggcacactgctcaaacattg
acgcattatcagctctcacagacgttgtcttcatatctgcccagccagagccctttgttt
tcccagcagaggactctggagtcagaagcatccatctgtggaaaagagagatcacccttc
tgccatcaaggaggagatctccaatctatgagaaatataatggaaccatctttcaccttt
gatgaaatcagaagatcggataaaaagggccacactatagaggaaacagacatccctggt
gcttcattcagtccaacaaagtggaaacggtccaatcccggtgaagaagcagctcctaga
acagaagaagtacacttccagatgtcagagtctgaagcttttgaactggaaagtactatt
ttgaatgtacgtgaagctgaggagaggaaccacacagagttggagtctggatcttcacat
gttcagctggagtgttatccaaaaagacagtcagtgggaggtgaaagtgagaatttagca
gtgttgagctctgaactgagggtggagagtggacagatccaatcttctgatatccagctg
ccaacgaaagggtgcaagaaaaactacgaagagttacagccgacagagacagaaacagga
aagacgaaaccagacagagatgttcaaccttcctgttatgaacagaggagtcactctgca
gaggtttcagatggagatcgatggctcatgccagcattgtcccaggtgtgtgggacagaa
ccatcagcatgcagagctccacgtctccttgacaaccaacagcaccatgccaatgagcaa
agctctaatggaagcagcagagagagcacatcaagcgtgatgctaaactcatcagacact
attgctgctggacaaaacctctcctccgtgcatgaaggtactttagctgtaccagccgaa
aaactggaagaccaaagcctccatagttcccagagccagtcatatcatctttcctttcct
tcatcccttctcttgaagaggaagtgtgatgtgtctcagcagcaacatggagtccctcct
ctgaaaatgtaccgaccaagatttcctccaaagttggagtctttttttccgatgagtgct
gagtttgttcctccaaaaacagcttttgtccagtccagtcattgtacagaactccctcca
acacaaactcaacactattttggaatatttcaagatcggtgtagggaaactgagaaggat
gcttgtaagcagacccccttgtacaaaccatgcaagcgcaagtgtagcatcggaccgcct
gctagtagtctgaaagctttacctgaggctgttggcggtattgatctacagagccggttt
aaaaacgactgcttgccttccacgctggcatctgagtcaaaagtcacagatcttgggaag
ctaaaccctgaagaaaggatgcatattcttcagaaagccaaacaatctgaagtgctggtg
ctgactatgtggtaccaagacggaacaactcagttggaccctgaaccgaagctggcttct
ccagtgtgcggccttctcatactgatgaagagcgagtctcactgcggcacacctgaggac
tcacttgggttgaacgacagactggtctacttatcactgaagcacaaacatctttgggtg
caagatcaaaggaaccacaatgaggagcaatttaccagagatttgcttctacaagtgcta
tcaagatcttctctggcggtgtgctataaggccaaagatttgctccgtactgttcttcag
gtttacaaggaagacatcagctggaaacaagtttcaggttgtcaaatccaggatccacaa
gtgtctgggtggctactggatcctgcagaccaggcagcttgttaccaggatctccttttt
aaacactgccgaaggacctgcaccacacagagtttagtccccaagaaggtttctcagatc
atttcagatctctgttggcttcacaagcttcacatgatcctgtgttctaaactggagagc
cagggcttgtggaagctctactcagatgttgagttgagaatgatcccagttctagcagcc
atggagagccactgtatctatgtggacaaggagactttgaagaaaatgtctgacttgctt
gggactaaaatcaaacagctggagcaggaggcccaccaagcagctggacaaaaattcctg
gtgaccagcagcagtcagttaagaacggttttatttgagaagttgcgcctccatgaacat
tgtgagaacaagaagcttcccaaaaccatcaacaagcaacagtcaacatcagaggctgca
ttgctgcagctccaggacctgcaccccctgccaaaaatcattttggagtacagacaggtt
cacaaaatcaagtccactttcgttgatgggattctgtcctgcatgaagaccaagaactat
atttcctcgacatggtgccaaacaagtgctgtgacagggaggatttctgctaaacaccct
aacttccaggctctgccgaggcagccgcttcaaatcagcaagaagctgttcatccatgga
ggtgaggaggaggtggtgactgttcatcccagggccatgttcgttcctcagaagggatgg
acttttcttgctgcagacttctgccaggtggagctgcgtctgctggctcacttctcatcc
gactctgagctgctccgcctttttaccatcccacaggcggacgtcttcaccctgctggca
gctcagtggaaagggttaagcatggaagatgtgagttctgaggacagggagcacgctaaa
cgcatcatttactctgttatttatggagcaggtcgtgagcgattgtcagggatattgggg
gtcagtgctgagcaggctcaccagttccaggaccgtttccttcaaacctacagagatgtc
cagaccttcatccagagaaccatccagcagagccacaaacagggttatgtgctctccatc
atgggtcgccgaagaaaccttcccaacatcaactccccagactggggggtacgcatgcag
tctgagagacaggccgtcaactttgttgtgcagggttcagctgctgatctctgtaagatg
gcaatgatcagaatcttcaatctggtctccacttccagctcactcactgccaggcttgta
gcccagatccacgatgagcttctttatgaagtggaagactctcagctccaacagtttgca
gctctggtcaaaaacacgatggagtcgcttcagcacatcgatcatctaggagtccatctt
aaagtccccctgaaggtggcagtctccagcggcaagtcttggggatccatgtctgaattt
agcatgcctctgatgcccccttcctcttaa
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integrated database retrieval system
