Oryzias melastigma (Indian medaka): 112157453
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Entry
112157453 CDS
T07439
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00052
Galactose metabolism
oml00511
Other glycan degradation
oml00531
Glycosaminoglycan degradation
oml00600
Sphingolipid metabolism
oml00604
Glycosphingolipid biosynthesis - ganglio series
oml01100
Metabolic pathways
oml04142
Lysosome
Module
oml_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
112157453 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
112157453 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112157453 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
112157453 (glb1)
00511 Other glycan degradation
112157453 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112157453 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112157453 (glb1)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
112157453 (glb1)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112157453 (glb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
112157453
NCBI-ProteinID:
XP_024145949
Ensembl:
ENSOMEG00000000166
LinkDB
All DBs
Position
LG1:17765970..17775253
Genome browser
AA seq
649 aa
AA seq
DB search
MSLLRLICLFTLSFVQPLWAAPSFSLDYNADCFRKDGERFRFISGSIHYSRIPRVYWKDR
LLKMYMAGLNTIQTYIPWNYHEESPGMYNFSGDRDVEYFLKLAQDIGLLVILRPGPYICA
EWEMGGLPAWLLSKKDIVLRSSDPDYVAAVDNWMGKLLPMMQPYLYQNGGPIITVQVENE
YGSYFACDYNYMRHLTKLFRSHLGEDVVLFTTDGAGLNYLKCGAIQGLYATVDFGPGSNI
TAAFGAQRHAEPHGPLVNSEFYTGWLDHWGSQHSVVSPDLVAKSLNQQLAMGANVNMYMF
IGGTNVGYWNGANSPYSAQPTSYDYDAPLTEAGDLTEKYFAIREVIKMYRKIPEGPVPPS
TPKYAYGAVTMKKLQTVVDALEILSFSGPVKSTHPQTFIDLNQAYGYVLYRTTLPVDCSE
PTPLSSPLNGVHDRAYVSVDGVAVGILERNKVISINVTGKAGSQLDLLVENMGRINYGKG
INDFKGLVSNLTLGKDTLTGWTMYSLSIDDAVSQGRLGETSSARADPPQPGSLSTPAFYG
GSFIIPDGIPDLPQDTYIKLPNWRKGQIWINGVNLGRYWPARGPQMTLFVPVNLLTTAAP
NNVTVLELEGTPCNTQPCTVEFTTTPILNATVQSEYEQHRRLFAKEDLL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgctcagacttatctgcttgtttacgctgtcatttgtacaaccgctctgggca
gcaccttcattcagcctggactataacgccgactgcttccgtaaagatggggaaaggttc
cgtttcatttcaggaagcatccactacagcaggatccccagagtctactggaaagaccga
ctgctgaagatgtacatggcaggactgaacaccatccagacgtacattccctggaactac
cacgaagaatcccctggcatgtacaattttagtggagaccgggacgtggaatacttccta
aaactggcgcaggacatcggtttgctggtgatccttcggccaggtccctatatttgtgca
gagtgggagatgggcggcctgccagcctggctgctcagtaagaaagacattgtgctgcga
tcttctgatccagattacgtggcggcggtggataattggatggggaagttgttgcccatg
atgcagccttacctctaccagaacggcggtcccatcatcactgttcaggtggagaatgaa
tatggcagttactttgcctgtgactacaactacatgcgccacctgaccaaactgttccgc
tctcacctgggggaggatgtggttctgttcaccacagacggtgctggcctcaactacctg
aagtgtggcgccatacaaggcctgtatgccactgtggactttggtccaggttcaaatata
acagcagcctttggtgcacagcgccacgctgaaccccatggaccattggtcaactctgag
ttctacaccggatggttggaccattggggatctcaacactctgttgtatctccagatttg
gtggctaagtccctcaaccagcagctggcaatgggagcaaatgtcaacatgtacatgttc
ataggaggaacaaacgttgggtattggaatggtgctaactcgccttatagcgcacagccc
acaagctacgactacgacgcccctctgacggaggcgggcgacctgacagaaaaatacttc
gccatccgagaggtcatcaaaatgtatcgaaaaatcccagagggaccagttccaccatcg
acccccaaatacgcatacggggccgtcaccatgaagaagctgcagacagtagtggacgct
ctggaaatcttgtctttctctggtcctgtcaaaagcacacatcctcagactttcatcgat
ttaaatcaggcttatgggtatgttctgtacagaactacactgcctgtagactgcagtgag
cccacccccttgtcgtcccctctgaatggggttcatgaccgggcgtatgtttcagtggat
ggggtggctgttggaatccttgaaaggaacaaagtcataagcatcaatgtgaccgggaag
gcgggcagtcagctggacctgctggtggagaacatgggccggatcaactacgggaaagga
atcaatgacttcaagggtttggtgtccaacctgaccttggggaaggacacactcactggc
tggaccatgtacagtctcagcatagatgatgctgtcagccagggccgtcttggagaaaca
tcttctgcgagggcagatcctcctcagccgggttctctatccacaccagccttctatgga
ggaagctttataattccagacggcatcccagacctccctcaagacacttacatcaagctg
cccaactggaggaagggccagatctggattaacggtgtcaatttggggcgttactggccg
gctcgagggcctcagatgactctatttgtgccggtcaacctcctcaccacagctgcaccc
aataatgtgaccgtcctggagctcgaaggaactccctgcaatacccagccgtgcactgtg
gagttcacgaccactcccatccttaatgccacagtccagtcggagtatgaacagcacagg
agactctttgcaaaggaagatttactgtga
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