Oryzias melastigma (Indian medaka): 112157948
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Entry
112157948 CDS
T07439
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112157948 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oml03310
]
112157948 (esr1)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112157948 (esr1)
Nuclear receptors [BR:
oml03310
]
3. Estrogen like
3A. Estrogen receptor
112157948 (esr1)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112157948
NCBI-ProteinID:
XP_024146830
Ensembl:
ENSOMEG00000009991
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Position
LG24:9517182..9527387
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AA seq
618 aa
AA seq
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MCKRQSSVQIRQLFGPALRSRISPASSELETLSPPRLSPRDPLGDMYPEESRGSGGVAAV
DFLEGTYDYAAPNPAATPLYSQSGYYSAPMETNGPPSEGSLQSLGSGPTSPLVFVPSSPR
LSPFMHPPNHHYLETTSTPVYRSSHQGASREEQCGSREETCGVGELGAGAGAGGFEMAKD
TRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQACR
LRKCYEVGMMKGGVRKDRVRILRRDKRRTGVADGDKVVKGQEHKTVPHYDGRKRSSSTGG
GGGGGGGGRLSVTSIPPEQVLLLLQGAEPPILCSRQKLSRPYTEVTMMTLLTSMADKELV
HMIAWAKKLPGFLQLSLHDQVLLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDRNEG
DCVEGMTEIFDMLLATASRFRVLKLKPEEFVCLKAIILLNSGAFSFCTGTMEPLHNSAAV
QSMLDTITDALIHHISQSGYLAQEQARRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVP
LYDLLLEMLDAHRLHRPVRAPQSLSQVDRDSPSTSSGGGGGVGVAPAFRGRIESPNRGLS
APSVLQYGGSHSDCTPAL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagagacagagctcggtgcagatcaggcagctgttcggacccgcactcagatcc
aggatcagcccagcctcctcagagctggagaccctctccccgcctcgcctctcgccccgt
gaccccctcggtgacatgtaccctgaagagagccggggctccggaggggtggccgccgtg
gacttcttggaagggacgtacgactatgccgcccccaaccccgccgcgacgcctctttac
agccagtccggctactactccgctccgatggagacgaacggacccccctcggaaggcagc
ctgcagtctctgggcagcgggccgacgagtcctctggtgttcgtgccctccagccccaga
ctcagtcccttcatgcatccgcccaaccaccactatctggaaaccacttccacgcccgtt
tacagatccagccaccagggagcctccagggaggagcagtgcggctcccgggaggagacg
tgcggcgtgggggagttgggcgccggagccggggccggggggttcgagatggccaaagac
acgcgcttctgcgccgtgtgcagcgactacgcctccgggtaccactacggggtgtggtcc
tgtgagggctgcaaggccttctttaagaggagcatccagggtcacaatgactatatgtgc
ccggcgaccaatcagtgcactattgacaggaatcggaggaagagctgtcaggcttgtcgt
cttaggaagtgttacgaagtggggatgatgaaaggaggtgtgcgcaaggaccgcgtccgc
attttacggcgtgacaaacggcggacaggcgtcgctgatggagacaaggtcgtaaaaggc
caggagcataaaacagtgcctcattatgatggaaggaaacgcagcagcagcacaggagga
ggaggaggaggaggaggaggaggaagactgtctgtgaccagcatacctcctgagcaggtg
ctgctcctccttcagggcgccgagcccccgatactctgctcccgtcagaagttgagccga
ccgtacaccgaggtcaccatgatgaccctgctcaccagcatggccgacaaggagctggtc
cacatgatcgcctgggccaagaaactcccaggtttcctgcagctgtccctgcacgatcag
gtgctgctgctggagagctcgtggctggaggtgctcatgatcggcctcatttggaggtcc
atccactgtcccggaaagctcatcttcgcacaggacctcatcctggacaggaatgagggc
gactgcgtggagggcatgacggagatcttcgacatgctgctggccaccgcatcccgcttc
cgtgtgctcaaactcaaacccgaggaattcgtctgcctcaaggcgattattttactcaac
tccggtgcattttctttctgcaccggcaccatggagccgctacacaacagcgcggcggtt
cagagcatgctggatactatcactgatgcgctcattcatcacatcagccagtcgggctac
ttggcccaggagcaggccagacggcaggcccagctgctcctgctgttgtcccacatcagg
cacatgagcaacaaaggcatggagcacctctacagcatgaagtgcaagaacaaagtgcct
ctttacgacctcctgctggagatgctggacgcccaccgcctgcaccgccctgtcagagcc
ccccagtccttgtcccaagtcgacagagactccccctctaccagcagtggcggtggcggc
ggggtcggagttgctcccgcttttcgaggcagaatcgagagcccgaatagagggctctcc
gcccccagcgtccttcagtatggagggtcgcattctgactgcaccccggccctttaa
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