Oryzias melastigma (Indian medaka): 112159355
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Entry
112159355 CDS
T07439
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00531
Glycosaminoglycan degradation
oml01100
Metabolic pathways
oml04142
Lysosome
Module
oml_M00076
Dermatan sulfate degradation
oml_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112159355 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112159355 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
oml02042
]
112159355 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112159355 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112159355 (si:dkey-72l14.3)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
112159355 (si:dkey-72l14.3)
Bacterial toxins [BR:
oml02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
112159355 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Enzymes
112159355 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Enzymes
112159355 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
112159355
NCBI-ProteinID:
XP_024149141
Ensembl:
ENSOMEG00000007841
LinkDB
All DBs
Position
LG7:complement(2251449..2256832)
Genome browser
AA seq
422 aa
AA seq
DB search
MACTKAHFHPDPQPEPKPTAFSSAASLLLLLFLGLFACPCRSAPPQPARPPLLSGQPFII
FWGILDSSCSNRADARSFGMERERIAVFYEDTLGSYPYFVDKNTPVNKGLPQHTRLNSHI
QKLQQDLDAALPSPRYLGLGVLRWAEWLPQWSRNREKQAMYQDASRKLMKSFFPKWTPEE
VEKWSKVDFEAAAQSVMMESLREVKRLRPKALWGFSPYPSCNNNDPTQTVLGNYSGQCTP
AEAALNDQLLWLWKRCSALYPLLTLDKLQSGTPGARLSSSGQIREALRVSSLAGRDFDLP
VFPLVKSVYASTKTFLSQTDLVNTIGESAAMGTAGIVIWDKSEPKTERECQDLAEFVQKV
LGPYFVNITTATQLCSASLCQGRGRCVRLDPDSSAYLHLPPSSTAAGKVAEKVKNVKRLT
DK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcaccaaagctcatttccatccagacccacagccggaaccaaaacccactgct
ttttcatcagccgcctccctcctgctcctcctcttcctcggtctctttgcctgcccctgc
aggagcgctcctccccagcccgcccggcctcctctcctgtccgggcagcctttcatcatc
ttctggggaatcctcgactcctcctgctccaacagagcagatgccaggtcctttggcatg
gagcgagaacgcatcgccgtcttctacgaagacacgctgggaagctacccttactttgta
gacaaaaacacgcctgtcaacaaggggcttccgcagcacacacgcctcaacagccacatc
cagaaactgcagcaggacttggatgcagctctgccttccccgaggtacctggggctgggg
gtgctgcgctgggcagagtggctcccccagtggtccaggaaccgagagaagcaggccatg
tatcaggacgcgtccaggaagctgatgaaatccttctttcctaaatggaccccggaggag
gtggagaagtggtcaaaggtggacttcgaagcagcagcccagtccgtcatgatggaaagt
ctgcgtgaggtcaaaaggttgaggcccaaggcgctgtggggcttttctccttacccgagc
tgcaacaacaacgaccccacccaaacagtattaggcaattacagcggccagtgcactcct
gctgaggcggccctcaacgaccagctcctgtggctatggaaacgctgctccgccctctac
cccctcctgactctggacaagctgcagagcggcactcctggagcccggctttcctcatcg
ggtcagataagagaggctttacgggtctcgtctctggctggaagagattttgatcttcct
gttttccctttggtcaagagtgtctacgcctcgacgaaaacctttctatcgcagactgac
ctggtcaacactataggagagagcgctgccatgggaactgcagggattgtcatctgggat
aaaagtgagcctaaaacagagagagaatgccaggacctggcggagttcgtccagaaagtg
ctgggaccctacttcgtgaacatcaccacggcaactcagctgtgctcagcatccctctgc
caggggaggggtcggtgtgtccgtctggatccagacagctccgcttacctccatctgcca
ccctcatccacagcggctggaaaggtggcagaaaaggtaaaaaacgttaaacgtttaaca
gacaaatga
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