Oryzias melastigma (Indian medaka): 112159757
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Entry
112159757 CDS
T07439
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112159757 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112159757 (lamb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
DUF2959
F5_F8_type_C
Alanine_zipper
Laminin_II
Motif
Other DBs
NCBI-GeneID:
112159757
NCBI-ProteinID:
XP_024149781
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All DBs
Position
LG7:complement(29968677..30003878)
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AA seq
1744 aa
AA seq
DB search
MRRKEPYCIVSHLQDEKKCFECDSRRPYHPVYNTINHRIENVITTFKPHRKNSWWQSENG
KSDVFIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQVYRYFSHDCAASFPGV
SHGALRNINDVICESRYSDIEPSTEGEVIYRVLDPSIRIEDPYSPAIQNQLKITNLRVNF
TKLHTLGDNLLDPRAEIKEKYYYAIYELVVRGNCFCYGHASECAPIEGVRDDIEGMVHGR
CVCNHNTKGLNCEQCDDFYNDRPWRPAEGRNTNACKKCNCNDHSNICHFDMAVYLATGNV
SGGVCDDCQHNTMGRNCEMCQLFYYKDPFKDIRDPHVCKPCDCDPDGSQNGGMCDSHTDL
SLGMMGGQCRCKANVEGPRCDKCKTGFFGLSADSAQGCQPCRCDHRGTVSGSSQCDPVSG
DCFCKRLVTGRSCDQCLPEHWGLSHDLSGCRGCDCDVGGALDNLCSMESGQCRCRSHMTG
RQCTQVESGYFFMALDHFLYEAEFAKMGQGCTLETREHQPGRPASWTDVGFARVPEGGTL
EFTISNIPHSMEYDLLIRYESQMPRDWEEVQISVIRPGSIPTSSPCGNTIPDDDSLLVSL
PAGARFVVPPQPVCLERDVIYTLRFEFTRYQDANSILIGGSNAVLLVDSIALMPRHSSLE
MFTAGDPASTVRKQTYERYRCHEGAKSVIRPQMSDTCAKLISSMSAIINDGALACNCDPQ
GSVSSMCDVRGGQCRCRPNVIGRRCDKCAPGTYGFGPSGCLPCDCSLEGSVTRFCDKFSG
QCQCRPGAFGQRCDGCQAGHWGFPSCRPCQCNGHADQCEQRTGACINCRDNTGGDKCDRC
ADGYYGNPVLGQSSGGQCRPCPCPEGPNSGRHFAASCYQDNRNLQIICNCNQGYTGIVKR
SGSTIFKRARCEECAPGYYGNPSQPGGRCQPCQCNNNIDMSDMDACDRRTGECRKCLYNT
EGSNCNLCRSGYYGDAARRNCRKCTCNFLGTERSQCMERDDCVCQRATGQCQCLPNVVGL
TCDHCAPNHWNLASGTGCEPCNCDPNNSVTSSCNEFTGQCQCRDGFGGQTCRDCQENFWG
DPRTLCRACDCDWRGIETSQCHRATGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCF
GDWDRIVQDLAVRTQALAEQAHEIQTTGLIGPYEKLFKDLEEKLARAQGIVSERNATAAA
VSTLMELIEDLRAQIGETTDTLNRLEGDLTLVQDSNSEASKELSALEREAKELNLTSEQL
HHQLDILKNSNFLGAYDSIRSSYNRSRDAERRANESTITRPSTVSQSADTRRRTERLIAA
KRDDFNRKNAANKRGLGDLNAKVQDLDMSRINEKVCGSSSDDPCGESPCGGAGCRDDEGN
RHCGGLNCDGAVAEAGDALQKAKQAEQELNKALEETQGLFTKVAEAKSKAEEAKSKAQAA
LDKATATKNKVERSNNDLRDLIKQIRNFLTQEGADPDSIEAVANHVLKLSIPASPPQIRH
LADEIKERVRSLSNVEAILKETEEDVRKAEQLLLDAKRARHHAEGVKSTAEGVTQALLDA
QTAQTSAEKAIAKAKSDIGETGSRLAQIEFETSDNEKDLNDAMDRLGTLGREINILKTKC
AENKMAAARAEETATMARDKANEAKQILDGQLTDKYNEVQQRVDTKAKAVQEAKKKAESF
REEANDLLKDAQDKLKRLAELELSYEENQRKLEGKARQLDGLEDKMREILNEINLKVRIY
NTCQ
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggaaggagccttactgtattgttagtcacttgcaggatgagaaaaagtgcttt
gaatgcgattccaggcgtccttatcatccggtctacaacaccattaaccaccggatcgag
aacgtcatcaccaccttcaagcctcaccgcaaaaactcctggtggcagtcagagaacgga
aagtctgatgttttcatccagctggatctggaggcggagtttcatttcactcatctcatt
atgaccttcaagactttccgtccagcagccatgctcatcgagcgatcggcagacttcggc
cgtacctggcaggtgtatcgatacttctcacacgactgtgctgcttcctttcccggagtt
tcccatggtgctttgcgtaacattaacgacgtaatctgcgagtcccgctactctgacatc
gagccgtcaacagagggagaggtgatctacagagttctggatccatccatcaggattgag
gatccatacagtcctgccatccagaatcagctgaagatcaccaacctgagagtgaacttc
actaaacttcacaccctgggagacaacctgctggaccccagagcagaaatcaaggagaag
tactactatgccatctatgagctggtggtccgcgggaactgcttctgctacggccatgct
tcagagtgcgcccccatcgagggtgtcagggatgacatagagggaatggttcacgggaga
tgtgtttgtaaccacaacaccaaaggtttgaactgtgagcagtgcgatgacttctacaat
gaccggccgtggaggccggccgagggccgcaacaccaacgcctgcaagaagtgtaactgt
aacgaccactcaaacatttgccacttcgacatggcggtgtacttggccacggggaacgtc
agcggtggagtctgtgatgactgtcagcacaacaccatggggcgcaactgtgagatgtgt
cagctgttctactacaaagaccccttcaaggatattcgagaccctcatgtctgcaaacct
tgtgattgtgatccggacggctcacagaatggtggaatgtgcgacagccacactgacctg
tcgctcggcatgatgggaggtcagtgccgctgcaaggccaacgtggaaggcccgcgttgt
gacaagtgcaagaccggcttcttcggcctgagtgcggacagcgcgcagggctgccagcct
tgccgttgcgaccatcgaggaaccgtgtcgggaagctcccagtgcgacccggtcagtgga
gactgcttctgcaagcggcttgtgacggggcggagctgcgaccagtgtttgccagaacac
tgggggctgagccacgacctgagcggctgcagaggctgtgactgtgatgttggaggagcg
ctggacaacctttgctccatggagagcggtcagtgtcgctgccgcagtcacatgacagga
cgccagtgtacacaggtggagtctgggtacttttttatggccctggatcacttcctgtac
gaggctgagtttgccaaaatggggcagggctgtactttggagaccagggagcaccaaccg
ggccgccctgcctcctggacagacgtgggctttgcccgagtccccgagggcggcaccctg
gagttcaccatcagtaacattcctcactccatggagtatgatttgcttatccgctacgag
tcgcagatgcctcgcgactgggaggaggtacaaatatctgtgatccgtccaggttccatt
cccaccagcagcccctgcgggaacaccatcccagatgacgacagtctcctggtgtccctc
ccggccggagccaggtttgtggttcctcctcagcctgtgtgtctggagagggatgtgatc
tacactcttcgctttgagttcacacggtaccaagatgccaacagcatcctcatcggagga
tccaacgccgtcctcctcgtggattctattgctctgatgcctcgccactcctccttggag
atgtttactgcaggagatcccgcctccactgtcagaaagcagacgtacgagcggtaccgc
tgtcacgaaggcgcaaagagcgtgatccgccctcagatgagcgacacctgcgccaaactg
atcagcagcatgtcggccattatcaacgacggggctctggcttgtaattgcgacccacag
gggtcagtcagctccatgtgtgatgtcagagggggccagtgtcgctgccggccaaatgtg
atcggccgaaggtgtgacaaatgtgcaccgggaacctacggctttggaccctcaggctgc
ttaccctgtgactgcagcctggaaggttcagtgacccgattctgtgacaagtttagcggg
cagtgccagtgccgtcccggagcgttcggtcagcgctgtgacggctgtcaggcgggtcac
tggggctttcccagctgccggccctgccagtgcaacggccacgctgaccagtgcgagcag
agaaccggagcctgcatcaactgcagagacaacaccggaggagacaagtgtgacaggtgt
gctgatgggtactacggaaaccccgttttgggtcagtcatccgggggtcagtgtcgtccc
tgtccctgcccagagggacccaacagcggacgtcactttgctgcatcttgttaccaagac
aaccgtaacctgcagattatctgcaactgtaaccagggttacacagggattgttaaacgc
tccggatcgaccatttttaagcgagcgcgctgtgaggaatgcgccccgggttactatggc
aacccctctcagccaggggggcgctgccagccgtgtcagtgcaacaacaacatagacatg
tcggacatggacgcctgtgacaggcggactggagagtgcaggaaatgcctctacaacacc
gagggatccaactgcaacctctgcaggagcggatactacggcgatgcggcgcgccgcaac
tgcaggaagtgcacgtgcaacttcctggggacggagcgcagccagtgcatggagcgggat
gactgtgtgtgccagcgcgccaccggacagtgtcagtgtctgcccaacgttgtgggtctg
acgtgtgaccactgcgcccccaaccactggaacctggccagcgggacgggctgtgagccg
tgcaactgtgaccccaacaactctgtcacgtcctcgtgcaacgagtttacgggtcagtgt
caatgtcgggacggctttggaggtcagacgtgcagggactgtcaggagaacttctgggga
gaccccaggacactctgcagagcttgtgactgtgactggcgtgggatcgagacctcccag
tgccaccgagcgaccggccactgcgtctgccagcagggcgtgtccggggtccgctgtgac
cagtgcgcccggggcttttccggccaattccccaactgccagccctgtcaccagtgcttt
ggggactgggatcggatcgtgcaggacctggcagtgcggacccaggccctggcggagcaa
gcccacgagattcagaccaccggacttattgggccttatgagaaactctttaaagacctg
gaggagaaactggctcgagctcaggggatcgtcagcgaacgcaacgccacggccgccgcc
gtctctactttaatggaactcatagaagatctgagagcacaaatcggcgaaacaaccgac
accctgaaccgcctagagggagacctaaccctagttcaggacagcaactctgaggccagc
aaggagctgagcgctctggagagggaggccaaagaactgaacctgacctcagagcagctg
caccaccaacttgacatcctcaaaaactccaacttcctcggtgcgtatgacagcatccgc
agctcctacaacaggtctcgcgacgcagagcggcgagcaaatgaatcgactataacgcgg
cccagcacggtcagccagtctgcagacacccgccgccgtacagagcgcctgatcgccgcc
aagagggatgacttcaaccgcaaaaacgctgcaaacaagcgcgggctgggagaccttaac
gccaaagtacaggatctggacatgagccggatcaacgagaaggtctgcgggtcatcgagt
gacgatccttgtggagagagcccgtgtggaggagcaggttgccgtgacgatgagggaaac
agacactgcggaggcctgaactgtgacggagctgtggcagaggccggggatgctctgcag
aaggccaaacaggcagaacaagagctgaacaaagccttggaggagacacagggactcttt
accaaggttgcagaagcgaagagcaaagcagaggaagcgaagagcaaagctcaggcggcg
ctggacaaagccaccgccaccaagaacaaagtggaacgctccaacaacgacctgagggac
ctcatcaagcagatcaggaacttcctcactcaggagggggcggatccggacagcatcgag
gccgtggcaaaccatgtgttgaagctctccatccccgcttccccgccccagatccgacac
ctggccgacgaaatcaaggagcgcgtccgcagcctctccaacgtggaagccatcctcaag
gagacggaggaggatgtgcgcaaggcagagcagctgctgctggacgccaagagggccagg
catcacgctgaaggagtgaagagcacagcagagggcgtcactcaggctttactggacgct
cagacggctcagacgtcggcagagaaggccatcgccaaagccaagagtgacatcggagag
acggggagccgcctggctcagattgaattcgagacatccgacaacgagaaagacctgaac
gatgccatggaccgcctcggcactctgggacgggaaatcaacatcctgaagaccaaatgt
gccgaaaacaagatggcggcagcccgtgccgaagagacggccaccatggctcgggacaag
gcaaacgaggccaagcagattctagacggccagctgacagacaaatacaacgaggtgcag
cagcgggtggacaccaaggccaaggcggtgcaggaggccaagaaaaaggcggagagcttc
cgagaggaggctaacgatttactgaaagatgctcaagacaagctgaagagactagcagag
ctggagttgagctacgaggagaaccagaggaagctggagggaaaagctcgacagctggac
ggcctggaggacaaaatgagagaaatcctcaacgagatcaacctgaaggtccgcatctac
aacacgtgtcagtaa
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integrated database retrieval system