Oryzias melastigma (Indian medaka): 112161304
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Entry
112161304 CDS
T07439
Symbol
smyd3
Name
(RefSeq) histone-lysine N-methyltransferase SMYD3
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112161304 (smyd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112161304 (smyd3)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112161304 (smyd3)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
112161304 (smyd3)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112161304 (smyd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
DUF4419
Motif
Other DBs
NCBI-GeneID:
112161304
NCBI-ProteinID:
XP_024152173
Ensembl:
ENSOMEG00000010891
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Position
LG3:21910132..21969868
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AA seq
436 aa
AA seq
DB search
MAPMLERFVSPGKGNGLQAKTKIRRGVLITSTEPLAYCVSNKWAREVCHHCFTRCETLLR
CSQCKTARYCNAACQKQAWPGHKKECRCLCNLLPRRPTDSVRLSARLIFTLLNPPQSNSE
ELYSIDEHKSHLDLMPEQKKEGLSELAAMLELYMQKEIPDLKQRMTSELPLSCRETLSII
AKVTCNCFTISDGELQELGVGLYPSLSLLNHDCRPNCVMVFRGTELQLRAVQDINPGEEL
TISYIETLSVTEDRQKQLEDQYHFTCQCQRCSSRDQDGVMLSGREDAWRQLKEALSRLEG
LQSESNWRELLESCSDLLTNVGEEVPDENLYKLKITDMALDASVHLGRWEEALSFGVKTL
PAYRLYYPDPHPVHGLQLMRVGKLQHHLGCIEDALGSFKEAFKILKLTHGEDHPLTADLM
MKMEECRSEMDLQPSS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgatgctggaacgttttgtaagcccaggaaaaggtaacggtttacaggcaaaa
acaaagatcaggagaggggttctgattacctcaaccgagcccctggcgtactgtgtttct
aacaaatgggccagagaggtctgccatcactgctttacccgatgtgagaccttgttgagg
tgttctcagtgtaagacggctcgttactgcaatgctgcttgtcagaaacaagcatggcct
ggtcataagaaagagtgtagatgtctgtgcaacctcctacccagacgtccgactgattct
gtgcgcctttctgcaagactcatttttaccctgttgaaccctccgcagagcaatagtgag
gagctctacagtattgatgagcataaatcacatctggatttgatgcctgaacagaagaag
gagggtctatctgaactggcagccatgttggagctgtacatgcaaaaagaaattcctgat
ctgaaacagagaatgacatcagagctgccgctttcctgtagagagactctcagcatcatt
gcaaaggtgacatgtaattgtttcaccatcagtgatggagagctacaggagctaggagtg
gggctgtatccaagtttatctctgttaaaccatgactgccggcccaactgtgtgatggtc
tttagggggacagaactgcagctcagagctgtgcaggatattaacccaggagaggagctg
acgataagttacatcgagactttgtctgtgactgaagatcggcagaagcagctggaggac
cagtatcatttcacctgccaatgccaacgctgcagctcaagggaccaggatggagtcatg
ctgtcagggagggaagacgcctggcgccagctgaaggaagccctgtcaaggctggaagga
ctgcagtcagagtccaattggcgagaacttttagagagctgcagtgatttgttgactaat
gttggtgaggaagtccccgatgaaaatctctataagctcaagattactgatatggctttg
gatgcttctgttcatctggggcgatgggaggaggctttgtcgttcggggtgaagacactt
ccagcttacagactgtactacccggatcctcacccggtccatggactccagctgatgaga
gtgggaaaactgcagcatcacctgggatgcattgaggatgctttgggctcattcaaagag
gcctttaaaatcttgaagttgactcatggtgaagatcaccctctgacagctgacctgatg
atgaagatggaggaatgtcgtagtgaaatggatcttcaaccatccagctaa
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