Oncorhynchus mykiss (rainbow trout): 100136285
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Entry
100136285 CDS
T07259
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule precursor
KO
K06454
T-cell surface glycoprotein CD4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250
Viral life cycle - HIV-1
omy03260
Virion - Human immunodeficiency virus
omy04060
Cytokine-cytokine receptor interaction
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100136285 (cd4-1)
03260 Virion - Human immunodeficiency virus
100136285 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100136285 (cd4-1)
04514 Cell adhesion molecules
100136285 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omy04090
]
100136285 (cd4-1)
CD molecules [BR:
omy04090
]
Proteins
100136285 (cd4-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
Izumo-Ig
Sp38
Motif
Other DBs
NCBI-GeneID:
100136285
NCBI-ProteinID:
NP_001118011
Ensembl:
ENSOMYG00000000824
UniProt:
Q32QB0
LinkDB
All DBs
Position
3:30751387..30774955
Genome browser
AA seq
489 aa
AA seq
DB search
MKCVSGFLSIIIALFISSTGAEDVVVYGQVGETVTLPRSKWGSERVLVQWFFGIDTQPLI
SRNSHGRETIDPEWKDRLSLSKTDFSLIINNIRLEDFKSFKCELKDFMPQTSTSVTFRLF
RVSVQPVSPLLAGKNLNLKCDIEEIFKGTQRRWLSPQKQDLNEDKRAQIRNDGSLTVMSV
TDQDHGEWTCVVTYQGREAYANTHVTVIDLSPAHPQPIYTSVSSLSLLHLPCFLSIPPPL
SWSDSQEKSIQGGRWTFTPSPAAGSLTGVVQTLANLSLGPPLAWVVNQKRELDVSALQRT
NLNLSLSKKGVTEGDRGEYTCAVEFQRGDTLKRSMRVEVLQVFSSPAPVAFVGQEVNLTC
TLGHPLTSDLKVKWIPPRQSSLLALGSAPDSAHLTIPEARDINGGRWRCELWRNKTKLTS
VEITLKIERVPMDVWLLVTICDAAVIFVLLLILTVILNRRHRQRVTMPRRGKRRICRCKD
PQPKGFYRN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtgtttctggattcctttcaatcattattgcattgttcatctcctcaacaggg
gctgaagatgtggttgtgtatggtcaggtgggagagacggtcacactccccagatcaaag
tggggttcagaaagggtgttggtacaatggttctttggaatagacacacaacctttgata
tcccgcaactcccatggtcgagagacgatagatccagagtggaaagacaggctgtctctg
tccaagacggacttctccctgattatcaacaatatcagactggaggacttcaaatccttc
aaatgtgaattgaaagatttcatgccacaaacaagtacctcagtcacattcagactgttc
cgtgtgagtgtacagccagtatctcccctgttggctgggaagaatcttaatctaaagtgt
gacatagaggaaatatttaaggggacacaaagaagatggcttagtccccagaaacaggac
ctgaatgaggacaagcgtgcccagatcagaaatgacggcagcctgacagtaatgagtgtc
actgaccaagaccatggagagtggacctgtgtggtgacataccagggcagggaagcctat
gccaacactcatgttactgtaatagacctctcccctgctcatccacagcctatctacacc
tctgtctcctccctctctcttctccatctgccatgtttcctttccattcctcctccacta
tcctggtcagacagccaggagaagagcatccagggaggccgctggacctttaccccaagc
ccagcggcaggctccctcactggggtcgtccagaccctcgccaacctctccctggggcct
ccattagcctgggtggtcaatcagaagagagagctggatgtctccgccctgcagaggaca
aatctaaacctctccctgtcaaagaaaggggtgacggagggggacaggggcgagtacacc
tgcgctgtggaattccagaggggggacaccctgaagagaagtatgcgtgtggaggtgcta
caggttttttcctctccagctccagtggcctttgtaggtcaggaggtcaacctcacctgc
accctgggccaccctctgacctctgacctgaaagtgaaatggatcccaccacgccaatcc
tccctcctcgcgttaggctccgcccccgactccgcccatctcaccataccggaagcgagg
gatataaatggtgggaggtggaggtgtgaattgtggaggaacaaaaccaagctgacgtca
gtggagatcacactgaagatcgagcgagtccccatggacgtgtggctgttggtcaccatc
tgtgacgcagccgtcatattcgtcctcctcctcatcctcactgtcattctcaaccgacgc
cacagacagcgggtgacgatgcccagacgtggcaaacgcagaatctgccgctgcaaagac
ccccaaccaaaaggattctacagaaactag
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