Oncorhynchus mykiss (rainbow trout): 110488652
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Entry
110488652 CDS
T07259
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110488652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omy04090
]
110488652
04091 Lectins [BR:
omy04091
]
110488652
CD molecules [BR:
omy04090
]
Proteins
110488652
Lectins [BR:
omy04091
]
I-type lectins (Siglecs)
110488652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Ig_5
V-set_CD47
Ig_4
Ig_6
C1-set
C2-set
Izumo-Ig
Lep_receptor_Ig
ICAM1_3_5_D2
FIIND
Motif
Other DBs
NCBI-GeneID:
110488652
NCBI-ProteinID:
XP_021416675
Ensembl:
ENSOMYG00000009104
LinkDB
All DBs
Position
1:complement(15309943..15316397)
Genome browser
AA seq
423 aa
AA seq
DB search
MKKMQLLQLCAFFYVTVCSQIEEVAISPPGNEVFVLAGSAFQFTCACVGSCKTPQFSWTR
ATTDSDGMRTKNSTLKFSNVKIEDAGRYTCDAKCDDSSEKKLKSVKMTVYAFSQPVLVMP
SILTENVACDVTCSVDAFDHVDSVHISWYLGSELIKDETQQTLDAANVSDTLTLTALRDY
TGKSLTCEVKADMRNNSKQVSYCLDIHYAPKINISASSSGMEEEEVVMSCRSDGNPTPTI
EWERKGELWPKNLHRHAQGNVTGRLHRSNQGVYQCVAKNVVSEVKEEMKLEVQYGPANTS
IQSFPQQAISYGVQLNLTCLSDMYPKAKQYIWTRIPDMALPKEAMVTNSHLIIDNFQEHH
QGIYECRVIHHSGNTERAFYTASVQAEPESKVFTQMVGAVAGSLVSGITGGIVAGFMLAK
WLK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatgcaacttcttcaactgtgtgccttcttctatgtcacagtctgtagtcag
atagaagaagtcgccatttcacctcctgggaatgaggtatttgtgctagcaggttcagcc
ttccagttcacctgtgcttgcgttggtagttgtaagacaccacagttcagctggacaaga
gctactactgactctgatggtatgcgaaccaaaaacagcactctcaaattttccaacgtg
aagattgaggatgcgggtcgatatacctgtgatgcaaagtgcgatgacagttcagagaaa
aaactaaaatctgtcaagatgactgtctatgcttttagtcaacctgtgttggtgatgcca
agtattttgacggaaaatgtggcttgtgatgtaacatgcagtgttgatgcatttgaccac
gttgacagtgtccacataagctggtatctaggaagtgagcttattaaagatgaaactcag
cagactttggatgcagctaacgtgtcggacacactgactcttactgccctgagggactat
actgggaagagtctgacctgtgaagtgaaagcagacatgagaaataactcaaaacaggtt
tcttactgtctcgacatacactatgcacctaagatcaacatcagtgcttcctcatctggg
atggaagaggaggaagtggtgatgagctgtagaagtgacggcaaccccacccctactatt
gagtgggagagaaaaggggagctgtggcccaagaatctgcatcgacacgcacaaggaaat
gtcacgggccggctacaccgcagcaaccaaggggtttaccagtgtgtggccaagaacgtg
gtgtccgaggtaaaggaagagatgaaactggaggtgcaatacggaccagcaaacacaagt
atccagtccttcccacagcaggccatttcctatggggttcagctgaaccttacctgcttg
tcagacatgtaccccaaagccaaacagtacatctggaccagaatcccagatatggcccta
cccaaggaggccatggttacaaacagccatttaatcatagataacttccaagagcaccac
caaggcatctatgagtgtagagtgattcaccacagtgggaatacagagagagcattctat
accgcctctgttcaagcggagcccgagtctaaggtgttcactcagatggtgggtgcagtg
gctggcagtcttgtcagcggaatcacaggaggcatcgtggcaggattcatgttagctaaa
tggctgaagtga
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