Oncorhynchus mykiss (rainbow trout): 110488722
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Entry
110488722 CDS
T07259
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X2
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04210
Apoptosis
omy04218
Cellular senescence
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04622
RIG-I-like receptor signaling pathway
omy04623
Cytosolic DNA-sensing pathway
omy04625
C-type lectin receptor signaling pathway
omy04920
Adipocytokine signaling pathway
omy05132
Salmonella infection
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110488722
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110488722
04218 Cellular senescence
110488722
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110488722
04621 NOD-like receptor signaling pathway
110488722
04622 RIG-I-like receptor signaling pathway
110488722
04623 Cytosolic DNA-sensing pathway
110488722
04625 C-type lectin receptor signaling pathway
110488722
09152 Endocrine system
04920 Adipocytokine signaling pathway
110488722
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110488722
09171 Infectious disease: bacterial
05132 Salmonella infection
110488722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110488722
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
110488722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
110488722
NCBI-ProteinID:
XP_021416720
Ensembl:
ENSOMYG00000006671
LinkDB
All DBs
Position
14:complement(8686829..8722370)
Genome browser
AA seq
911 aa
AA seq
DB search
MAEEEAYLPHPQYYDIEPIWDPLNFTPMSLTNSLRTADGPYLEIIEQPKQRGFRFRYGCE
GPSHGGLPGASSEKNRKSYPQVKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCDKGI
CITDQQPKDSSISFPNLGILHVTKKNVSKTLEDRMTEAYRMGYNCGIVIHPEIDAIQGEV
RIPRELTDHQRSMICSAATKQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPIFDS
KAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGDFSP
TDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRK
RQKTLPNFQDYSGQGGAGGMYRGPGGGGSATGGGPGSGGGGYFQAYSTYNNYGTGYSAGF
SPGMSGGGAGIKHATQGRAEDSGDDCDMGDDPSSGAVVADRAQSEEDASAGETKCMLEAR
LVDVAERQAEALFHYAVTGDVRYLLAPQRHLMTAQDENGDTGLHLGVIHSQTDAVRSLAQ
VLSALPGEEVLNMRNDLYQTPLHLAVITQQKEAAEALVLAGADVTLSDRHGNTALHLATQ
QKEGGMVGFLLRHREVVELVDLPNTAGFCSLHLAVLANSLCSLRDLLVSGGNVEGQERSC
GRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHIAAGRGSVKLTALLMAAGAN
PHKENFEPLFFREDDCCVDEEEDEGYIPGMTPLNMAATPEVLEILNGKEYKPETTIPVFI
PPQGDMRSLGSDTKRALCQALECQGGSWESLANTLGLGILNSAFRLSPSPASTLLDSYEV
SGGMVMDLLEGLRMVDNSTALTVLQGALCETEQAPLAPRSTTELLGRVQDLKLDGQEDSG
VCDSGVELSTA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggaggcttacctccctcacccacagtactatgacatagagccaatatgg
gatcctctgaattttactcccatgtcactcaccaactcactccggacagcagatggaccc
taccttgaaatcattgaacagcctaaacagcggggcttcaggttccgttatgggtgtgag
ggaccctctcacggtgggcttccaggggcctccagcgagaagaacaggaagtcatatccc
caggtcaagatctgtaactaccaggggttggcacgtgtggtggtacagctggtgaccaac
tctaaagatgcccacctccatgcccacagtttggtgggcaagcagtgtgacaaaggcatc
tgcatcacagaccaacagcccaaagactccagcatcagtttccccaacctgggcatcctc
catgtgaccaagaagaatgtgagtaagacactggaggaccgcatgactgaggcctacagg
atgggctacaactgtggcattgtcatccaccccgagatagacgccatccagggagaggtt
cgcatcccccgggagctcactgatcaccagagaagcatgatctgcagtgcagcaaccaag
caggctaaagagatggacctaagcgtggtgcgcctcatgttcacagccttcctcccagat
agtgacgggggcttctcccgtagactggaccccgtcatatcagaccccattttcgacagc
aaagctcctaatgcatccaacctgaagattgtgcggatggaccgcacagctggctgtgtg
acaggaggagaagaggtctacctgctctgtgacaaggtccagaaagatgacatccaggtg
cgcttctatgaggatgacgagacagggctgacatgggaggcctttggggacttctccccc
actgatgtccatcgacagtttgccattgttttcaagacccccaaatacagagacctgaac
ctccagaagcccacctcagtgtttgtgcagctgaagcgtaaatcggacaacgagacgagc
gagcccaagcctttcacctaccacccacagatcatagataaggaagaggtgcagaggaaa
agacagaagaccctgcctaatttccaggactacagcggccaaggtggagcagggggcatg
taccggggaccagggggaggaggctccgctacagggggaggacccggctcagggggagga
ggttacttccaggcctattccacctacaataactacggcaccggctatagcgctggcttt
tcccctggcatgagtggtggcggggcgggcattaaacatgctacacagggcagagcggag
gacagcggtgatgactgcgacatgggcgatgacccgtcctctggggcagtggtggcggac
cgagcccagtcggaggaggatgcctctgccggggagacaaaatgcatgctggaggctagg
ctggtggatgtggctgagaggcaggctgaagccctcttccattacgccgtcactggagac
gtccgctacctgctggctccacagcgccacctcatgacggctcaggacgagaacggcgac
actggtctccatctaggggtgatccacagccagacagacgcagtcaggagtctagcccag
gtgctctctgccctgcctggagaggaggtcctcaacatgaggaatgacctctaccagact
cctttgcacctagcggtaataacccagcagaaggaggcggccgaggccctcgtattggct
ggggctgatgtcactctgtctgatcgccacggaaacacagctctacacctggccactcag
cagaaggagggagggatggtgggatttctactaagacacagagaggtggtggaactagtg
gacctccccaacacagcaggattttgctccctccacctggctgtgctggccaatagccta
tgttccctcagggacctcttggtgagcgggggcaatgtggagggccaggagaggagctgc
ggccgcacggcactccacttggccactgagctggacaacgtctccctggcaggctgcctg
ctactggaggggaatgctgatgtggactgctgcacctacaacggctccagccctctccac
atagcagcaggccggggctctgtcaaactgaccgctctcctcatggctgcaggtgccaat
cctcacaaagaaaactttgagcccctgttcttcagagaggatgactgctgtgtggatgag
gaagaggatgaaggctacatcccagggatgactcctcttaacatggctgccactcctgag
gtgttggaaattctgaatggcaaagagtacaagccagagaccaccatcccagtcttcatc
ccccctcaaggcgacatgcggagcctgggctcagacacaaagcgggcattatgccaggcc
cttgagtgccagggggggagctgggagagcctggcaaacacgctggggctgggcatcctc
aacagcgccttcagactcagcccctcccccgccagcacactgctggacagctacgaggtg
tctgggggaatggtcatggaccttttggaggggctcaggatggtggataactccaccgcg
ttgacagtactgcagggggcactgtgtgaaacggagcaggctcctctagctccccgaagc
accacagagctcttaggacgtgtccaggatctgaagctggacggacaggaggacagtggc
gtgtgtgacagtggggtggagctctccacagcgtga
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