Oncorhynchus mykiss (rainbow trout): 110492626
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Entry
110492626 CDS
T07259
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110492626
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110492626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Alanine_zipper
F5_F8_type_C
EzrA
Motif
Other DBs
NCBI-GeneID:
110492626
NCBI-ProteinID:
XP_036803514
Ensembl:
ENSOMYG00000042292
LinkDB
All DBs
Position
16:complement(68703920..68772253)
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AA seq
1797 aa
AA seq
DB search
MHVTPVIFICALAYATAQGPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKEPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGRNWQVYRYFAYDCASVFPGISKGPLRK
VDDVTCESRYSDIEPSTEGEAIYRVLDPSIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELIVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHNDVPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLSTGNANGGVCDDC
LHNTMGRTCEMCKPFYYLNPSRDIRDPGVCSACDCDPDGSLNGGICDGHDEPSLGMVAGQ
CRCKDHVEGPRCDKCKSGFFGLSADHPLGCQACQCDPRGTVSERPPCDPVSGDCFCKRQV
TGRSCGQCLPEHWALSHDLNGCRDCDCDVGGATDNHCSMDNGQCRCRSHMMGRQCTQVES
GYFFMALDHYTYEAELAMLGQGCSVEQREHQPERPATWTGTGFAKVPEGSSLEFSINNIP
YSMEYDLLIRYESQMPQDWEEVRVTIVRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPQSICLERGISYTLHFEFSRYLNGNNVLIPGTTAANILVDSISLLPRYSSLEMFIGGDP
ASIARKQSYERYRCHDGAKSVARPQISDVCAKHITSMSAIINHGALACQCDPQGSVSSVC
EMRGGQCRCRSNVIGRRCDHCAPGTYGFGPAGCRACECSLEGAVTRFCDQLTGQCPCSQG
AFGQRCDGCQAGHWGFPNCKQCLCNGHAEECHQRTGACLNCRENTGGDKCDRCANGYYGN
PVLGTGNGNRCQPCPCPDGPNSGRHFATSCHQDNRNRQVVCNCNQGYTGGMVKRSEGSFK
RSRCEECAPGYYGNPSRPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPDCGV
CKSGYYGDASRRNCRKCTCNFLGTAQTQCTARDECVCQRATGQCLCLPNTIGLTCDHCEP
NYWNLASGRGCEACGCEPNNAVNPACNEFTGKCQCRDGFGGKICTDCQENYWGDPRIQCR
ACDCDPRGIETSQCGQKTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVV
QNLAVRTKTLSERAVEIQNTGLTGAYEKAFRDLEEKLARAQGIVNARNTTTEAVSSLMEL
IEDLRSQIGETTDVLNHLEGDLTSVGNSNVEASNELSVLEREAKELNLTSDQLHRQLDIL
KNSNFLGAYESIRSSYNKSRDAERRANQSTTTTPSTVSQSADTRRKTERLISAKKDDFNR
KNAANKRALGDLNAKAQTLDMKKINEKVCGGPGDSPCVESHCGGAGCRDEEGNRHCGGLN
CNGAVAMAENALEKSKHAEKELNIAMKEVEELFHKVADAKTKAEEAKGKAQAALDKATNT
KNKVERSNNDLRNLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKD
RVRSLSNVDAILKQTQDDVRKAEQLLQEAKKARNRADGVKSTAETVKRALEDAKTAQAAA
EKAIQRAKVDIGETEVRLAQIESETSSSEHDLNNAMDRLGNLGRGIDGLKLKRAKNSMAA
ARAEETATMARDKANDAKQILDGELTDKYHTVQDLVDRKAKTVQEAKKTAERLRDEAKEL
LKDAQDKLQRLAELEKDYEENQKKLEGKARQLDGLEDKMKAILNDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgacaccggtcattttcatctgtgccctagcctatgccaccgcccaggggccc
gaccacgcccacggctgtacccatggcagctgttaccccgcaacgggagacctgttggtg
ggccgtgagaagagcctgaaggcctcgtctacctgtggctccaggaagaaagagccttac
tgtatcgtcagtcatctacaggatgagaagaaatgtttccagtgtgactctcgccggcca
tatgacccggtctacaataccatcagtcaccgcattgagaacgttatcacaacgtttaaa
ccacaccgcaagaagtcctggtggcagtcagagaatggaaagcctgatgtcttcattcaa
ctggaccttgaggcagaattccatttcactcatctaatcatgaccttcaagacgtttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaactggcaggtgtaccgc
tactttgcctacgactgtgcctcggtcttccccgggatatccaaaggtcccctgcgcaag
gtggatgatgtcacctgtgagtcccgctactctgacatcgagccatccactgagggagag
gccatctacagagttttggacccttccatccacattgaggacccctacagccccaacatt
cagaatcagctgaagatcactaacctgcgtgtgaacttcaccaagctgcacaccctgggt
gacaacctgctggactcccgcgtggagatcaaggagaagtactactacgccatgtatgag
ctgatcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccacgggaggtgtgtgtgtaagcacaacaccaag
ggtctgaactgtgagctgtgtgacgacttccataacgacgtgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgcaactgtaatggtcactccaaccagtgtcac
tttgacatggcggtgtatctttccacgggcaatgccaacggtggcgtctgtgacgattgt
ctccacaacaccatgggacgcacttgtgagatgtgtaaacccttctattacctgaacccc
agcagggacatcagagacccaggagtctgtagtgcctgtgactgtgatcctgatggttcc
ctgaacgggggcatctgtgacgggcatgatgagccgtccctgggcatggtcgctgggcag
tgccgctgcaaggaccatgtggagggacctcgctgtgacaaatgcaagtctggcttcttc
ggcctgagtgcagaccatcctcttggctgccaagcctgccagtgtgaccccaggggtacg
gtgtcagagagaccaccgtgtgaccctgtgagcggggactgtttctgcaagcgccaggtc
accggacgcagctgtggccagtgtctgccagaacactgggcactgagtcacgacctgaat
ggctgcagagactgtgactgtgatgtgggcggagccaccgataaccactgttcaatggac
aatgggcagtgtcgttgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
gggtacttcttcatggctctggaccactatacctacgaggctgagctggccatgctggga
cagggctgcagtgtggagcagagggagcaccagcctgagcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttctccatcaacaacatcccc
tactccatggagtacgacctcctcatccgctatgagtcgcaaatgccacaggactgggag
gaggtccgtgtgactatcgttcggccagggcccattcccaccagcagcccatgtggaaac
accatccctgcagacgacatgctaactgtttccctgcctgcaggatccaggtttgtcgtg
ctgcctcaatctatctgcttggagagaggaattagctacacgcttcactttgagttcagt
cgctatctgaacgggaacaatgttctcattcccggtacaactgctgccaacattctagtg
gactctatctccctcctcccacgttactcctccctggagatgttcatcggcggagacccc
gcctccattgcccggaaacagagttacgagcgctaccgctgccatgacggggctaagagt
gtggcacgcccccagatcagtgacgtctgtgccaaacacatcaccagcatgtcagccatc
attaaccatggagctttggcttgccagtgtgacccccagggttcagtcagctcagtgtgt
gaaatgcgcggaggtcagtgtcgctgtaggtccaatgtgattggacggcgctgtgaccac
tgtgctcctgggacgtacggctttggacctgcaggatgtagagcctgtgagtgtagccta
gaaggtgcggtcactcggttctgtgaccagctgactgggcagtgcccatgcagccagggt
gcgtttggccagcggtgcgatggatgccaggcaggacactggggcttccccaactgtaag
cagtgcctgtgtaacggacatgctgaggagtgccaccagaggaccggagcctgtctcaac
tgcagggaaaacactggaggggacaaatgtgacaggtgtgccaatggttactacggcaac
ccggtgctgggcacaggtaacggtaaccgatgccagccctgcccctgcccggatggccca
aacagcggaagacacttcgctacctcctgtcaccaggacaaccgcaacagacaggtggtc
tgcaactgtaaccaaggatacacaggggggatggttaagcgctccgagggttccttcaag
cgttcccggtgtgaggagtgtgccccaggttactacggcaacccctcccggccaggtggg
cgatgccagccgtgcaggtgcagtaacaacattgacatgtcagacctggatgcgtgtgac
cggaggacaggagagtgtaagaagtgtctctacaacacagagggaccggactgtggcgtg
tgcaagagcggttactatggagacgcctcgcgacgcaactgcagaaagtgcacctgtaac
ttcctgggcacagcgcaaacccagtgtacagcacgggatgagtgtgtctgccagcgtgcc
acagggcagtgcctgtgtctacccaacactatcggcctgacatgtgaccactgtgagccc
aactactggaacctggctagtgggcggggctgtgaggcctgcggctgtgaacccaacaac
gctgtcaacccggcctgcaacgagttcactggaaagtgtcagtgtcgtgacggatttggt
gggaagatctgcacagactgccaagagaactactggggcgacccaaggatccagtgtaga
gcctgtgactgtgacccccggggcatagagacctctcagtgtggccagaagacaggccac
tgcgtgtgtcaacagggggtgtcgggcgtgcgttgtgatcagtgtgcccggggcttctca
ggccagttccctaactgccagccctgccaccagtgctttggggactgggaccgggtggta
cagaacctggctgtccgaaccaagaccctgtcggagcgggctgtggagatccagaacacg
ggcctgactggagcctatgagaaggccttcagagacctggaggaaaagctggcacgagct
cagggcatcgtcaatgcccgcaacaccaccacagaggcagtcagcagcctgatggagctc
attgaagacctcaggtctcagataggggagaccacagatgtactgaatcatctggaggga
gacctgaccagtgtggggaacagtaatgttgaggccagtaatgagctcagtgttctagag
agagaggccaaagagctcaacctgacctcagatcagctccaccgccaactggacatcctg
aagaactctaactttctgggtgcatatgaaagcatccgaagctcctataataagtcccgt
gacgcagagcggcgagccaaccagtccaccactaccacgcccagcactgtcagccaatca
gcagacacccgccgcaagacagaacgcctcatttctgccaagaaagacgacttcaaccgc
aagaacgccgccaacaagcgagccctgggggacctcaatgccaaggcacaaaccctggac
atgaagaagatcaacgagaaggtctgtgggggccctggcgattccccctgtgtagagagc
cattgcggaggggcgggttgccgtgacgaagaggggaacagacactgtggaggcctgaac
tgcaacggtgccgtagcgatggcagagaacgccttggaaaagtctaagcatgcagagaaa
gagctgaacatagccatgaaggaggtagaggagctcttccacaaggtggcagatgccaag
accaaggcggaggaggcaaagggtaaagcccaggcagctctggacaaggccactaacacc
aaaaacaaggtggagcgctccaacaacgacctgcggaacctcatcaagcagatccgggac
ttcctcatgcaggagggtgctgatccagacagcattgaaacggtggctaaccgtgtcctg
gagctgtccatcccagcctcaccacagcagatcagacacctggcagaggagatcaaggac
cgggtccggagcctctccaacgtagacgccattctgaaacagacacaggacgacgtgcgc
aaagcagagcagctgctgcaggaggccaagaaggccaggaatcgggcagacggggtgaaa
tccacagcagagacggtgaaacgggcacttgaggacgctaagacggcccaggctgcagcg
gagaaggccatacagcgggcgaaggttgacattggtgaaacggaagtccgactagcacag
atcgagtctgagacctccagcagtgaacatgacctgaataatgccatggatcgccttggc
aacctgggtcgggggattgacggtctgaaactcaaacgtgcaaaaaacagcatggcagca
gctcgagctgaggagacagccactatggcacgggacaaagccaatgatgccaagcagatt
ttagatggcgagctgacggataagtatcacacagtgcaggacttggtggacaggaaagcc
aagaccgtccaggaggccaaaaagacagcagagcgcctgagagacgaggccaaggagcta
ctgaaagacgctcaggacaagctccagagactagcagaactagagaaagactatgaagag
aaccagaaaaagttggagggcaaagcccggcagttggacggcctagaagacaagatgaag
gctatcctcaatgacatcaacaaacagattcagatctacaacacctgtcagtaa
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integrated database retrieval system
