Oncorhynchus mykiss (rainbow trout): 110494570
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Entry
110494570 CDS
T07259
Name
(RefSeq) transcription factor E3 isoform X1
KO
K09105
transcription factor E3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110494570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110494570
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
110494570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
110494570
NCBI-ProteinID:
XP_021425424
Ensembl:
ENSOMYG00000020367
LinkDB
All DBs
Position
17:74918264..74928441
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AA seq
420 aa
AA seq
DB search
MSSRLLLRQQLMREQAQEQERQEAQEQASVAQLRATDSTPAVAVTLPPIAARPLSAQVPV
EVLKVQTHLENPTKFHIQQSQRQQVKQHLSATLCNKVAIQTLGVSPLALSSSAPEMDPIA
RSVTNSSMASHNLGSNKEELPWNLLEVNHSPGMAVPTHTVSNSCPVDLTNIKREYSDADN
KARVKERQKKDNHNLIERKRRFNINDRITELGSIIPHSRDSELRWNKGTILKASVDYIRK
LQKEQQRAKEVEMRQKKLEHANHCLMLRIQELEVQAQLHGLSSPMSYGLSSDPSFPQQQH
LQQGGHILGPRTGVACSQTFLSLGDAAMAQPIPTSFLSPPSSDSPAGVTIGSPLDLGSLR
FAELDDPSNAGLFPGVGLGDIVMDEGCTQSPERVDPLFFVSPGASKTSSRRSSFSMEEDL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacgcttgttgcttcggcagcagctgatgcgagaacaagcccaggagcaagag
agacaggaggcccaggagcaggcctctgtggctcagctcagggcaactgactccacccct
gctgtcgctgtcactctgcccccaatagctgctcgccctctttccgcacaggtgcccgtg
gaggttttgaaggtgcagacccacctggagaaccccaccaagtttcacatccagcagtct
cagaggcagcaggtgaagcagcatctctctgccaccctctgcaataaggtggcaattcag
accctgggtgtgtctcccctggccctgtctagctctgcccctgagatggatcccatagcc
cgcagtgttaccaacagctccatggcttcacacaacctgggatccaacaaagaggagctc
ccctggaacctcctggaagttaaccatagtcctggaatggcagtacctacccacactgtc
agcaactcctgccctgtggatctaaccaatattaaaagggaatactctgatgcagataac
aaagctcgggtgaaagagagacagaagaaagacaaccataacctcattgagaggaagcgg
aggtttaacatcaatgaccgcataacagagctggggtccataataccccattcaagggac
tcggagttgcgctggaataagggcaccattctgaaggcctcagtggactacatcaggaag
ctgcagaaggagcagcagagagccaaggaggtagagatgcgtcagaagaagctggaacat
gctaaccactgcttgatgctgcgcatccaggagttggaagtgcaggctcagcttcatgga
ctctccagcccgatgtcctatggtctgagttcagacccctccttcccccagcagcagcac
cttcagcagggaggtcatatacttgggcccagaactggagtagcctgctcccaaaccttt
ctcagcctgggtgatgcagccatggcacaacccatccctacctccttcctctctccaccc
tcctctgactcccctgcgggtgtgaccataggcagccccctcgacctgggcagtctgcgc
tttgccgagctggatgacccctccaatgctgggctgttcccaggcgtggggttgggggac
attgtcatggatgaggggtgcacacagtcccctgagagggtggacccactgttttttgtg
tcaccaggtgcctcaaagaccagcagtcgtaggagcagcttcagcatggaggaggacttg
taa
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