Oncorhynchus mykiss (rainbow trout): 110495101
Help
Entry
110495101 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110495101
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110495101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110495101
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110495101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
110495101
NCBI-ProteinID:
XP_036805267
LinkDB
All DBs
Position
17:21648684..21768363
Genome browser
AA seq
1838 aa
AA seq
DB search
MYKVLHLHSSTMLVSLLSPSSLQDRRVTSSFPPPPPEHSSSPHQQPRLALPSLSLPLSLS
LILLSLFLLPICESARSPGRGGAGQGGGAPGGAPGTGGAGGEKGGQRGTNLIPPHYSPYY
PPVSPARPPAPPLPPKVASSLSIAVILVGNSSEVSSTYVEKEEFLHVPHPTKVQLETMND
TDPKSIINRICTLMTNTWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMA
AKDDHSMFFQFGPSIEQQASIMLKIMEEYDWYIFSIVTTYYPGYQDFVNKIRSTIENSFV
GWELEEVLLLDMSVDDGDAKIQNQMKKLQSPVYLLYCTKEEAYTIFEVANSVGLTGYGYT
WIVPSLVAGDADNVPAVFPTGLISVSYDEWDYSLEARVRDAVAVIAMATSTMMLDRGQHT
LLKSGCNETPNKKGSKQSNSNEVLKYLMNVTFEGRNLSFSEDGYQMHPKLVITLLDKQRR
WDKVGKWENSSLSMKYHVWPRFELFSDGEAREDDHLSIVTLEEAPFVIVEDVDPLSGTCM
RNTVPCRKQLKILNQTVPGQYTKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKKIN
GTWNGMVGEVEQKKAHMAVGSLTINAERSEVIDFSVPFIETGISVLVSRSNGTVSPSAFL
EPFSADVWVMMFVMLLLVSAIAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG
LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDNKF
QKPNAFSPPFRFGTVPNGSTERNIRNNYPEMHQYMTSFHQKNVNEALASLKGGKLDAFIY
DAAVLNYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKDSGWKRAVDLAILMLFGDGEMEE
LEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHAFYWQLRFCFM
GYCTGKPGFTFSISRGIWSCIHGVQIEENKSAMDSPSATMNMNMNNTHSNILRLLRTAKD
MTAIPGVNGSPHTHGALDYGGHHRGESPSIYDVSEHRRSLQERKALPPPYLPEDNMFSDY
ISEVERTFGNLPLKDNNLYQDHYLHHHSGPGPGLALGMSGPPPNRPSSVGSTSSLEGGMF
DCDSLGGGVAPIFTTQPRVASLTHRNTNKFDLIAGHTSASGSGQQGGQFKSNDLYGRFSF
KGGASSSGFIDRGGHDRYCMGGGGGGGGGSGGDDVSDISSHTITYGNLEGNAKRRKQYRD
SLKKRPASAKSRREQDEIDYRRRAHHHTVHHHFSRGPLGHRSASPPLVPSERKRGGGGGG
GNSSPYLFRDKENLREFYAEQVLSKQGSAKWEHVDVSDGPCPMGGRGGGVAGGSSGSGIC
KSLVPVEDFLKGNKPKKSEGKSDVVGGMGLGSSGQQAHTCWEKNMSEVGGGGIAGGDWEC
RNHSGGGGGGGGGKSISHHGGGGTCMHGSASGGGGGGGGGASGGGGNSRPSSASCKRCES
CKKPGNLYDISEDNLIFSQMGGGGGKSGDAGGAGQSQSHAQRRKLGPGGRVLRRQHSYDT
FVDLQKGGGGGRMGGGGGGGGGGGGGGQLLPPRSVSLKDKDRYMEGVSPYAQMFAQYAER
DRDSPSFFSRGGSERERAKGGSSFSLFRGERGEGGLHRRSVGEKDMRDRDRRMMGGGGGG
GGSGKWAGTYSLSKSLYPDKVTQNPFIPTFGDDQCLLHGGKPYYVKMSPQQQQQPPQHLL
NNSRGDFRGSMGVPSYFPASATTGVMSNVTPRFPNDLCLGGGFGGPMGNHHGPRLGGNKL
LPVRDGGLGLVGQGGQTPFNGSSNGHVYEKLSSIESDV
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggtactgcatttacactcctccacgatgcttgtcagcctcctctccccctcc
tcactccaggacaggcgtgtcacctcctccttcccccctccgcctcccgaacacagctct
tcccctcatcagcaacctcgcctggcccttccctccctctccctccctctctccctctct
ctcatcctcctctccctattccttctgcccatctgcgagtctgcgcggtcgcctgggagg
ggcggagctggacagggcggaggagcaccaggaggtgcacccgggacgggaggagcagga
ggcgagaaaggaggccagaggggcacaaacctcatcccccctcactactccccttactac
cccccagtatcccccgcccggccccctgcgccccccttacctcccaaagtggcctcctct
cttagcatcgccgtcatcctggtgggcaactctagcgaggtgtcgtccacctacgtggag
aaagaggagttcctccatgttccccaccctaccaaagtccaactggagaccatgaacgac
acggaccccaagagtatcatcaaccgcatctgcaccctgatgaccaacacctggctacag
ggggtggtgttcggggacgacacggaccaggaggccatcgcccagatcctggacttcatc
tctgcccagacacacatccccatcctgggcatccgaggaggctcctccatggtcatggct
gccaaggacgaccactccatgttcttccagtttggcccgtccatagagcagcaggcctcc
atcatgctgaagatcatggaggaatacgactggtacatcttctccatcgtcaccacctac
taccccggataccaggactttgtcaacaaaatccggagcaccatagagaacagttttgtg
ggctgggagctagaagaagtcctcctgttggacatgtctgtggatgacggagacgctaag
atccagaaccagatgaagaagctgcagagccctgtctacctgctttactgcaccaaggag
gaggcctacaccatctttgaggtggcaaactctgtgggactgacgggatacgggtacacc
tggattgtaccgtcgctagtggccggcgacgccgataatgtccccgccgtgtttcccaca
gggcttatttcggtgtcgtatgacgaatgggactacagtttggaagctcgggtgcgggat
gcagtggctgtcatcgccatggcgacctccaccatgatgctggaccgggggcaacacacg
ctgctcaagtcaggctgcaacgagacccctaacaagaagggctccaaacaaagcaactcc
aatgaagtgctcaagtatctgatgaacgtgacgttcgagggacgcaacctgtcgttcagt
gaggatggataccagatgcatcccaaactggtcatcaccctgctagacaagcagagacgc
tgggacaaggtgggtaagtgggagaacagctccctgtccatgaagtaccacgtgtggccc
aggttcgagctgttctctgatggggaggcccgggaggacgaccacctgtccatcgtgacg
ctggaggaggctccctttgtcatcgtggaggacgtggaccccctcagtggcacctgcatg
aggaacacagtgccgtgcaggaaacagcttaaaatactcaatcagacagtacctggccag
tacaccaagcgctgctgtaaaggattctgcatcgacatcctgaagaagatcgccaagcag
gtcaagttcacctatgacctctacctggtcaccaacggaaagcacggcaagaagatcaac
ggcacctggaatggaatggtcggggaggtggagcagaagaaggcccacatggccgtgggg
tcgctcaccatcaacgcggagaggtctgaggtcattgacttctccgtgcccttcatcgag
acggggatcagtgtcctggtctcccgtagcaacggcactgtctccccctccgccttcctt
gagccgttcagtgcggacgtgtgggtgatgatgtttgtgatgctgctactcgtgtcagcg
attgctgtgtttgtgtttgagtacttcagcccggtcggctacaaccgctgcctggcagac
ggacgagagcctggtggcccctccttcaccatcggcaaggccatctggctgctgtggggc
ctggttttcaacaactctgttcccgtccagaaccctaaaggcaccaccagtaagatcatg
gtgtcggtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggct
gccttcatgatccaggaggagtatgtggatcaggtgtcgggcctcagtgacaataagttc
caaaaacccaacgccttctccccgccattccgtttcggaacggtgcccaacggaagcacg
gaacggaacatccgcaacaattacccagagatgcaccagtatatgaccagcttccaccag
aagaatgtgaacgaggccctggcaagcctcaagggaggtaaattggatgccttcatctac
gatgctgctgtgttgaactacatggccgggagggacgagggctgtaaactggtgaccatc
ggcagcgggaaggtgttcgccaccaccggttacggcatcgccatccagaaggactctggc
tggaagagagcagtggatctggccatcctcatgctgttcggcgatggagagatggaggag
ctggaggctctgtggctgacggggatctgccacaacgagaagaacgaggtgatgagcagc
cagctggacgtggacaacatggcaggtgtcttctacatgctgggggcggccatggctctg
tcgctcatcaccttcattgccgagcatgccttctactggcaactgcgcttctgcttcatg
ggctactgcaccggcaagccaggctttaccttctccatcagcaggggcatctggagttgt
atccacggggtccagatcgaggagaacaagtcggccatggactctccatcggccaccatg
aacatgaacatgaacaacacccactccaacatccttcgactgctccgaacagccaaggac
atgaccgccatcccgggggtcaacggctcgccgcacacgcacggcgccctggactacggt
ggccaccaccgtggcgagtcgcccagcatctacgacgtctccgagcaccggcgcagtttg
caagagcgcaaggccctgccgccgccctacctgcctgaggacaacatgttcagcgactac
atcagcgaggtggagaggacttttggcaacttgcccctgaaggacaacaacctgtaccag
gaccattacctgcaccaccactcaggtccgggacctgggctggctctgggtatgtccggc
cccccgcctaacaggccgagtagcgtaggcagtaccagttcattggagggagggatgttt
gattgtgacagtttagggggaggggtagctcccatattcaccacacagccccgcgttgcc
tccctgactcacaggaacaccaataagtttgacctgatcgccggccacacctcggcctca
ggctccggtcagcaggggggtcagttcaagtcgaacgacctctacgggaggttctccttc
aaaggcggggcgtccagttctgggtttatcgacaggggcggtcacgacaggtactgcatg
ggtggaggaggagggggtggcgggggctcggggggcgatgatgtgtcggatatctcctca
cacaccatcacctatggcaatctggagggcaacgccaagaggcgtaaacagtacagggac
agcttgaaaaagaggcccgcctcagccaaatccagacgggagcaggacgagattgattac
cggaggcgagcccaccatcacaccgtccaccaccacttctcccgcgggcccctgggacac
cgctcggcctccccacccctggtcccctctgagcggaagagaggaggtggaggaggaggg
ggtaactcttcaccttacttattccgcgacaaagaaaatctgagggagttctatgcggag
caggtcctttccaagcagggctctgccaagtgggagcatgtggatgtgtccgacgggcct
tgtccgatgggcggtaggggaggaggagtcgctggcggtagtagtggtagtggcatttgt
aagagcctagtgcctgtggaggatttcctgaaaggtaacaaacccaagaagtcagagggt
aaaagtgacgtagtcggaggaatgggcttggggtcgtcagggcaacaggcccacacgtgt
tgggagaagaacatgtctgaagtggggggtggaggcatagcagggggtgactgggagtgt
cggaatcacagtggtggtggtggcgggggaggaggagggaagtccatttctcaccatggg
ggagggggcacctgtatgcatgggagcgctagtggcggagggggaggagggggtgggggc
gctagtggcggagggggaaatagtcgtccaagctctgcttcttgcaaacggtgcgagtcg
tgtaagaaaccaggcaacctgtatgacatcagtgaagataacctcatatttagccagatg
gggggtggaggggggaagagtggtgacgcggggggtgctggccaatcacaaagtcatgca
cagcgcaggaagctagggccaggtgggcgggtgttacggagacaacactcctacgacacg
tttgtggatttgcagaagggtgggggtggcggacgcatgggcgggggtggaggaggaggt
ggaggaggagggggaggggggcagctcctcccacccagaagcgtgagcttgaaagacaaa
gaccgctacatggagggagttagcccgtacgcccaaatgtttgcccagtacgcggagagg
gacagagatagtccctcctttttcagccggggtggtagtgagcgggagagggcgaaagga
ggctcctccttcagcttgttccgaggcgaacgaggagaaggtgggttgcaccgtcggtcg
gtgggggagaaagacatgagggacagggatagaagaatgatgggaggtggaggtggtggg
ggcggtagtggcaaatgggccgggacttactccttgtctaaatctctctacccagataag
gtgacccagaaccccttcatcccaaccttcggcgacgaccagtgtctattacatggcggc
aaaccgtactacgtcaaaatgtctccacagcaacagcaacaaccgccacagcatctcctc
aacaacagccgcggggactttcgaggctccatgggggtgccttcatattttccggcgtcg
gccacgacgggggtcatgtccaacgtgacccccaggttccccaatgatctgtgtctcggg
ggagggttcggggggcccatggggaaccaccatggccccagactgggaggcaacaagcta
ctgccggtcagggacggggggttagggttggtggggcagggcggccagacacctttcaat
ggctcgagcaacggccacgtttacgagaagctctccagcatcgagtctgacgtctga
DBGET
integrated database retrieval system
