Oncorhynchus mykiss (rainbow trout): 110502611
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Entry
110502611 CDS
T07259
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog-B
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110502611
Enzymes [BR:
omy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
110502611
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110502611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PrmA
MTS
Methyltransf_4
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Ubie_methyltran
Methyltransf_12
NodS
Methyltransf_32
Met_10
Motif
Other DBs
NCBI-GeneID:
110502611
NCBI-ProteinID:
XP_021436467
Ensembl:
ENSOMYG00000015836
LinkDB
All DBs
Position
23:33166314..33179381
Genome browser
AA seq
502 aa
AA seq
DB search
MLLILAGLRTALLKHKLVNVLVEACLCSGAKDTTTNPGKPPKLSKKKWRKKFRNKPASNE
HLPWEERLADAVTPLWRLSYYDQLQLKQKHQERILLQLSDQLLCGESTQHKALTQCTPPR
STKLSFPLLPILPSPVRDGYRNKSTFSVNRGVDGNPKTVGFYVGTGKVGNIVCVNGDHLL
NMPERHKLVARCYQDFLRLSALEPCLLFHDGGHWREVTVRTNAAGHTMAIVYFHPQRLTP
EEIEVHKSSLVEYFTQGPGAICQLDSLYFQESSMTRCSHEESPYQLLHGQPHIHEEILGF
KFRISADAFFQVNQGAADSLYRTVREMGLPNGAREVGGGGTLLDVCCGTGAIGITMSPRA
DRVIGIELIQQAVEDARHNAALNKIQNCEFLPGKAEVVLPGLMEVLGSTTASGGPLTAVV
NPARAGLHYRVIRTLRNHSSIRRLLYISCKPEGEAMRNFRELCCSPDPHRKLTGEAFRPT
VAVPVDMFPHTPHCELLLVFER
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaatactagcgggtttaaggacagcattactaaaacataagctagtaaatgtt
ctggtggaggcatgtctatgctcgggagccaaggataccaccaccaacccagggaaacca
ccaaaattatcaaagaagaaatggagaaagaagttcaggaacaagcctgcatcaaatgaa
cacctgccctgggaggagagactggccgacgctgtcactcctctgtggcgcctgagttac
tacgatcaactccagctgaaacagaagcaccaggagaggatcctactacagctctcagat
cagctcttatgtggagagtcgacccaacataaggccttgacacaatgtactccacccagg
agtaccaaactcagcttccctctgctgcctatcttaccgtcacctgtcagggacggctac
cgcaataagtctaccttctcagtcaaccgtggcgtggatggcaaccctaagacggtgggg
ttctacgtgggaacgggaaaggtgggaaacattgtgtgtgtgaacggggaccacctcctc
aacatgcccgagagacataaactggtggccaggtgctaccaggacttcctccgcctttca
gccctggagccctgtctgctgttccacgacggaggccactggagggaggtgacagtgagg
accaacgcagcaggccacaccatggccatcgtctatttccacccacagaggctcaccccg
gaggagatagaggtccataagtcctccctggtggagtacttcacccaggggcctggtgcc
atctgccaactagactccctgtacttccaggagagctccatgacccgttgcagccacgag
gaatccccctaccagctgctgcatggccagccacacatacacgaggagattttggggttc
aagttccgcatctcggcagacgctttcttccaggtgaaccaaggggcggcggattcgctg
taccgcacagtgagagagatgggcctcccaaatggagctcgagaggtaggaggagggggc
acactcttggatgtgtgctgtggaacgggggccatcgggataaccatgtcccccagagcg
gaccgggtaatcgggatagaactcatccagcaggccgtggaagacgccaggcacaacgca
gccctcaacaagatccagaattgtgagttcctccctgggaaagccgaggttgtccttcct
gggctcatggaggtcctgggctccaccactgcctctggaggccccctcacggctgtggtg
aacccagcccgcgctggactgcattatcgtgtgatccggactctaaggaatcactcatcc
atccgcaggctgctctatatctcctgcaaacccgaaggagaggccatgaggaacttcagg
gaactgtgttgcagtcccgacccacataggaagctgacaggcgaggctttcaggccgact
gtggctgtgcctgtggatatgttccctcacacgccacactgcgaactgctgttggtcttt
gaaagatag
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