Oncorhynchus mykiss (rainbow trout): 110504114
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Entry
110504114 CDS
T07259
Name
(RefSeq) paired box protein Pax-3-like isoform X1
KO
K09381
paired box protein 3/7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110504114
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110504114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_23
Homeobox_KN
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
110504114
NCBI-ProteinID:
XP_036817579
Ensembl:
ENSOMYG00000043216
LinkDB
All DBs
Position
24:27291673..27331941
Genome browser
AA seq
496 aa
AA seq
DB search
MTALAGAIPRMMRPMLAQNYPHSGFPMEVSTPLGQGRMNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVEKRIEE
YKRDNPGMFSWEIRDKLLMDGICDRNNVPSVSSISRIMRSKFGGEGDDDDDEDEIEKKEL
EEHERRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLDELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGASQLMAFNHLIPGGFPPSAM
SSLSPYQLSDSPYPPTSISQVVSEQASTLHRPQPLSPSSGHHQSSGGGGQDGGSAYCLAS
GRHSFSGYSDSFLSSGGPPMNPAISNGLSSQVMGLLNPGGVPHQPQSDYALSPLTGGLEP
PGGMGASCSQRLEHIKGLEGLSSVTNIPSLPSLPNSQSYCPSSYSAPAYSVDPVASYQYG
QYHGQSALHYLRPEIT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggctggggcaataccaaggatgatgcgccccatgctggcgcagaactac
ccccacagtggcttcccaatggaagtctctaccccgttaggccaaggcagaatgaaccag
ctcgggggagttttcataaatggcagacctttgcccaaccatatccgccataagatcgtc
gaaatggcccaccatggcatcaggccatgcgtcatctcccgtcaactccgggtctctcac
ggttgcgtttctaaaatcctctgccggtaccaggagaccggctctattcggcccggggcc
atcgggggaagcaaacccaagcaggggacgacgcctgatgttgagaagagaatagaggag
tacaagcgggacaacccgggtatgtttagctgggagattcgggataaattactgatggat
gggatatgtgaccggaacaacgttccatcagtgagctctatcagtcgcatcatgaggagt
aaattcggaggggagggagatgacgatgatgatgaagatgaaatcgagaaaaaggaatta
gaagaacacgaacggcgggccaaacacagcatcgagggcatcttaggagaccgatcgagc
cactcagatgaggggtcggatgtggagtctgaaccagacctgcctctgaagaggaagcag
cgccgcagtagaaccaccttcacggccgaacagctggatgagctggagagagcctttgaa
cgaacacactaccctgacatctacacgagggaagagctggctcagagggccaaactaaca
gaggccagagttcaggtgtggttcagtaacagaagagcccggtggaggaagcaggctgga
gctagtcagctcatggccttcaatcacctgatccctgggggcttcccgccctctgccatg
tccagtctctcaccttatcagctgtctgacagcccgtatccccctacatccatatcacaa
gtggtgtcggagcaggccagcacgctgcaccggccccagcccctttccccgtcctcaggc
caccaccagagctcaggagggggaggacaggatggggggtctgcctactgcctggcctct
ggacgccacagcttctcaggctactccgacagcttcctctcgtcaggaggccctcccatg
aaccctgccatcagcaatggcctctcttcacaggtgatgggtctgttgaacccaggtggg
gtgccccaccagccccagagtgactatgccctctcccccctgacaggaggcctggagccc
cctgggggcatgggggccagctgctcccagcgtctggagcacatcaagggtctggagggc
ctgtccagtgtcaccaacatccccagtctcccctcgctgcccaactcccagtcctactgc
ccgtcctcctacagcgctcctgcctacagcgtggaccctgtggcctcctaccagtatggg
cagtaccacggacaaagtgcccttcattatctgagacctgagatcacctga
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