Oncorhynchus mykiss (rainbow trout): 110504918
Help
Entry
110504918 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04210
Apoptosis
omy04218
Cellular senescence
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04622
RIG-I-like receptor signaling pathway
omy04623
Cytosolic DNA-sensing pathway
omy04625
C-type lectin receptor signaling pathway
omy04920
Adipocytokine signaling pathway
omy05132
Salmonella infection
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110504918
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110504918
04218 Cellular senescence
110504918
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110504918
04621 NOD-like receptor signaling pathway
110504918
04622 RIG-I-like receptor signaling pathway
110504918
04623 Cytosolic DNA-sensing pathway
110504918
04625 C-type lectin receptor signaling pathway
110504918
09152 Endocrine system
04920 Adipocytokine signaling pathway
110504918
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110504918
09171 Infectious disease: bacterial
05132 Salmonella infection
110504918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110504918
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
110504918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
110504918
NCBI-ProteinID:
XP_021439466
Ensembl:
ENSOMYG00000030929
LinkDB
All DBs
Position
31:complement(28066159..28090452)
Genome browser
AA seq
926 aa
AA seq
DB search
MAEEEPYLPHQPYNFDIDPLWDPLNFPPMSHSNSLRTVTADGPYLQIIEQPKQRGFRFRY
GCEGPSHGGLPGASSEKNRKSYPNIKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCD
KGICIADLQPKDSNISFPNLGILHVTKKNVSKTLEDRMSEAYRMGYNCGIVIHPEMDAFQ
GEFRIPRELTDHQRNLISSAASYQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPI
FDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGD
FSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEV
QRKRQKTLPNFQDYSGHGGAGGLYRGPGGXGGPATGGGGGFFQGYSTYNNYGTSYNSGFS
PGMSGGGAGIKHAPQGRAEDSGDDSDMNDDPASGAVVGVRAKSEDASAGETSEEGGAGVE
LGPGDRTGECVLVARLVDVAERQAEALFQYAVTGDVSYLLAPQRQLMTAQDENGDTGLHL
GVIHSQTDAVRSLAQVLSALPGEEVLNMRNNLYQTPLHIAVITQQKAAAEALLLAGADVT
LCDRHGNTALHLAAQQKEGGMVGFLLRHREIVELVDLPNTAGLCSLHLAVLANSLCSLRD
LLVNGGSVEVQERSCGRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHTATGR
GSVKLTALLMAAGADPHKENFEPLFFREHDCCMDEEEEEDEGYIPGTTPLNMAATPEVLE
ILNGKEYKPETFVFVPPQGDMQSLGSDTKRALCQALECPEDGWEMLAHILGLGILNSAFR
LSSSPASTLLDSYEVSGGKVKDLLEGLRTVGNCSALTVLEGALRETEHAPPAPQSTTKLL
ERVCDLKLDGWEDSGVCDSGVELSTA
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggagccttacctacctcaccaaccgtacaactttgacatagatccacta
tgggatcccctgaatttccctcccatgtcacactccaactcactccggacagttacagca
gatgggccctacctccaaatcattgaacagcctaaacagcggggcttcaggtttcgttat
ggctgtgagggaccttctcacggcgggctaccaggggcctctagtgagaagaacagaaag
tcctatcccaatatcaagatctgtaactatcaggggttggcacgtgtggtggtacagctg
gtgaccaactctaaagatgcccacctccatgcccacagtttggtgggcaagcagtgtgac
aagggcatctgcatcgcagacctacagccaaaagactccaacatcagtttccccaacttg
ggcatcctccacgtgaccaagaagaacgtgagtaagacactggaggaccgtatgtctgag
gcctacaggatgggctacaactgtggtatcgtcatccatcccgagatggacgccttccag
ggagagttccgcatcccccgagagctcactgatcaccagagaaatctgatcagcagcgca
gcgtcctaccaggctaaagagatggacctgagcgtggtgcgcctcatgttcacagccttc
ctcccagacagtgacgggggcttctcccgtagactggaccccgtcatatcagaccccatc
ttcgacagcaaagctccaaatgcatctaacctgaagatagtgcggatggaccgaacagct
ggctgtgtgacgggaggagaggaggtctacctgctctgtgacaaggttcagaaagatgac
atccaggtgcgcttctatgaggatgacgagacagggctgacatgggaggcctttggggac
ttctcccccaccgatgtccaccgacagtttgccattgttttcaagacccccaaatacaga
gacctgaacctccagaaacccacctcggtgtttgtgcagctgaagcgtaaatcggacaat
gagacgagcgagcccaagcccttcacctaccatccgcagatcatagataaggaagaagtg
cagaggaagagacagaagaccctgcctaacttccaggactacagcggccacggtggagca
gggggcctgtaccggggaccaggggggnnggggggtcccgctacagggggaggaggaggt
ttcttccagggctattccacctacaataattatggcaccagctacaactctggcttttcc
cctggcatgagtggtggcggggcaggaattaaacatgctccacaaggcagagcggaggac
agtggtgatgacagtgacatgaatgatgacccggcctcaggggcagtggtgggggtccga
gccaagtcagaggatgcctctgctggggagacgagtgaagagggcggggccggtgtggag
ctaggaccaggggacaggactggagagtgtgtgctggtggccaggctggtggatgttgct
gagaggcaggctgaagccctcttccagtacgccgtcactggtgacgtcagctacctgctg
gctccacagcgccagctcatgactgctcaggacgagaacggtgacactggtctccatctg
ggggtgatccacagccagacagacgcagtcaggagtctagcccaggtcctctctgccctg
cctggagaggaggtccttaacatgagaaacaacctctaccagactcctttgcacatagcg
gtgataacacagcagaaggcggcagctgaggccctcttattggctggggctgatgtcact
ctgtgtgatcgccacggaaacacagctcttcacctggccgcccagcagaaggagggaggt
atggtgggatttctactgagacacagagagatagtggaactagtggacctccccaacaca
gcaggactgtgctccctccacctggctgtgcttgccaacagcctgtgttccctcagggac
ctcctggtgaacgggggcagtgtggaggtccaggagaggagctgcggccgcacggcgctc
catctggccactgagctggacaacgtctccctggcaggctgcctgctactggaggggaat
gctgatgtggactgctgcacctacaacggttccagccctctccatacagccacagggcgg
ggctctgtcaagctgaccgctctcctcatggctgcaggtgccgatcctcacaaagaaaac
tttgagcccctcttcttcagagagcatgactgctgtatggatgaggaagaggaggaggac
gaaggctacatcccagggacaactcctctcaacatggctgccactcctgaggtgttggaa
atcttgaatggaaaagagtacaagcccgagaccttcgtcttcgtcccccctcaaggtgac
atgcagagcctgggctcagacacaaagcgggcactatgccaggctctggagtgcccggag
gatggctgggagatgctggcacacatactgggcctgggcatcctcaacagtgccttcaga
ctcagctcctcccccgcaagcacgctgctggacagctacgaggtgtctggaggaaaggtc
aaggaccttttggagggactcaggactgtagggaactgctctgctttgacagtactggag
ggggcactgcgtgaaacagaacatgctccaccagccccccaaagcaccacaaaactctta
gaacgcgtgtgtgatctgaagctggacggatgggaggacagcggagtgtgtgacagtggg
gtggagctctccacagcgtga
DBGET
integrated database retrieval system
