KEGG   Oncorhynchus mykiss (rainbow trout): 110508505
Entry
110508505         CDS       T07259                                 
Name
(RefSeq) nectin-4 isoform X1
  KO
K06593  poliovirus receptor-related 4
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
omy04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    110508505
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    110508505
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110508505
Cell adhesion molecules [BR:omy04515]
 Immunoglobulin superfamily
  Nectin family
   110508505
SSDB
Motif
Pfam: Ig_3 V-set I-set Ig_2 ig C2-set_2 Protocadherin TMEM154 RIFIN PRIMA1 He_PIG Neur_chan_memb Stevor DUF6249 Adeno_E3_CR2 EphA2_TM
Other DBs
NCBI-GeneID: 110508505
NCBI-ProteinID: XP_021444739
Ensembl: ENSOMYG00000024614
LinkDB
Position
28:10669340..10678831
AA seq 615 aa
MKLPVWDQNQWEAAWLVLWGFAVCVRGGFVEPPPSFALRSLTEGETRLPCQYQVQEDEQV
VQVSWIKELPDGTKEQITTAHRTEGHTEFGRYSGRVRFESRRSMVNSALLILTTEESDEG
QYICHISTFPYGNFERKLSLTVWTFPISSLDPVVLEEGQSFHVAASCRSVARPPPRLTWD
TDLPGQAQNRSSEGGVVSTHFSLHPLRSMNGMRLDCLVWHPALEQPRRISNRLVVQFPPD
ASVTGFDGNWYMGLKGAELRCESGGNPKPKNFTWTRDGKALPDGLTVDGARLLFGRALRQ
NDTGVYECVVNNGVGKRKVECNITVTETSRSVQEVIFDTLVMIIIGVAAGVLVIVMIIVI
ILVNRYHRRKNRKLEMALSKRMLEINTLSRQASSRRLNSVSTDPRGQNEDCTLLRLDSGM
KKSLMSLEDHPIYKGSQSTLGGKWGTVREGDLDYLGRPILYQSSWRECRESMRGAEMEGE
REERRRRVESYLKSSNMSLAYLFLSMPHNMWLSISQDSGLPSSLVPMKPQDHDGSVGPTD
IPPMLSNLGGQREGMTEGEDWSDRQDVLEVDEADFDTSSYQISEALSNHFHYSNGFLRPK
PHSNAILLHPRGQNI
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgaagttacctgtctgggaccagaaccagtgggaggcagcctggttggtgttatgggga
tttgcagtgtgtgtgaggggtgggtttgtggagcctcctccatcctttgcattgcggtcc
ttgacggagggtgagacgcggctgccctgtcagtaccaggttcaggaggacgagcaggta
gttcaggtcagctggatcaaggagctacctgatggcaccaaggaacaaatcaccaccgcc
caccgcacagagggacacacagagtttgggcggtactctgggagagtgaggtttgagagc
cgtcgctccatggtgaactctgctctgctcatcctgaccacggaggagtctgatgagggg
caatacatctgtcacatcagcacattcccctatgggaactttgagaggaagctgtcactc
actgtgtggaccttccccatctcctctctggacccggtggttctggaggagggccagtcc
ttccacgtggctgcctcctgccgctccgtggcccgccctccaccccgcctgacctgggac
acggaccttcctggccaggcccagaaccgcagctccgagggcggggtcgtgtccactcac
ttctccctgcaccccttgaggagcatgaatggcatgcggttggactgcctggtctggcac
cctgctctggaacaaccccgcaggatcagcaaccgcctggtggtgcaatttcccccagat
gcatctgtcaccggctttgatggcaactggtacatgggactgaagggagctgaactccgt
tgtgagtctggaggaaaccccaaaccaaaaaacttcacctggaccagggatggtaaggct
ctgccagatggcctgactgtggatggagcaaggcttctgtttggccgagccctgagacag
aatgacactggagtttatgaatgtgtggtgaacaacggcgttgggaaaaggaaagtagaa
tgtaacatcacagttacagagacatctcggagtgtgcaggaagtgatctttgacactcta
gtgatgatcattataggtgtggctgctggggtgttggtcatcgtcatgatcatcgtcatc
attttagtcaaccgataccacagacgcaaaaacagaaaattagagatggcgcttagcaaa
aggatgttagaaatcaacactctctccagacaggcctcctccaggagactcaactctgtc
agcacagaccccagaggacagaatgaagactgtacactactcagactagacagtggaatg
aaaaaaagcctaatgtcccttgaagaccatcccatctacaaaggcagtcaatccaccctc
ggtgggaagtgggggacagttcgagagggtgatttggactacctaggccgccccatcctg
taccaatccagctggcgcgagtgcagagagagtatgaggggggctgagatggagggagaa
agggaagagcgcagacgaagggtggagtcgtacctaaagagcagcaatatgtccctggcc
tatctgtttctctcaatgccacacaatatgtggctctccatttctcaggactctggcctt
ccttcctcccttgtccccatgaagccccaggatcatgatggcagtgtggggcccacagac
atccccccaatgctcagcaacctgggtggccagagggaaggcatgacggaaggggaagac
tggagcgacagacaggacgtgctggaggttgacgaggctgactttgacaccagttcatac
cagatctcagaggcactctccaaccacttccactacagcaacgggttcctgcggcccaaa
ccacactccaacgccatcctcctacaccccagaggacagaacatttag

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