Oncorhynchus mykiss (rainbow trout): 110509851
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Entry
110509851 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110509851
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110509851
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110509851
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110509851
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
110509851
NCBI-ProteinID:
XP_021446671
Ensembl:
ENSOMYG00000042242
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All DBs
Position
Y:complement(24291961..24321029)
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AA seq
953 aa
AA seq
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MRLFLLAVFLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQIYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTEQDGTCKEEKTLNGVADIKKVICTGPNETIPGNTTGRPIVPQCCYGFC
IDLLIKLAGTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRA
EPPDPKKKASFRSISTSLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtttctgctggcggtgttcctctcgtgctcctgtgcgcgggctggctgcgag
ccgaagatagtgaacatcggagccgtcctgagccagaagaggtacgagcaagtctttaag
gatgcagtgacccaggcgaaccagatatacgggagagataaattcaagttgaccgccatc
tccgtaacgcacaaacccaacgctatccagatggctctctccgtctgcgaggacctcatc
tccaaccaggtgtatgccatcctcgtgagtcatcctccccagtccaacgaccacctcacc
cccacgcctgtgtcctacaccgcaggcttctaccgcatccctgttgtgggcctcaccacg
cgcatgtccatctactccgacaagagtatccacttgtcttttctgcggactgtccccccg
tactcccaccaggctcacgtgtggttcgacatgatgcgagagtttcgatggaaccacatc
atcctgatcgtcagcgatgaccacgaggggcgggccgcgcagaaaagactggagacccta
ctggaggagagggaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggaccaaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgcgctgcttctagaggccaaagagctggaggctcgcgtcatcatcctctccgcc
agtgaagaggacgctgctgcagtttacaaggctgcccgtttcctcaacatgacgggctcg
ggttacgtgtggctggtgggagagcgggagatgtcgggtaaagccctgagtgaggcacca
gatggtctcattggcctccagctcatcaacggcaagaacgagtcggcccacatcaatgac
gcagtggccgtggtggcccagtccatccaggagctctttgagaaggagaacattactgag
ccacccagaggctgcgtgggaaacaccaacatctggaagaccgggcccctcttcaaaagg
gttctgatgtcatcaaagtacccagagggcctcactggacgagtggaattcaatgacgat
ggcgacaggaagtacgctcactacagcattctcaactaccagaagagtcgactcattcaa
gttgggatttacaatggaacacaggtggttatgaataatcagaggaagatcatctggccg
ggaggagagacagagaaaccgcggggctttcagatgtccacgagactaaagatagtgacc
atacaccaggagccctttgtgtatgtgaaacccactgagcaggatggaacctgcaaggag
gaaaaaaccttaaatggagtggcagatattaaaaaggtgatctgcactggaccaaatgag
accatcccaggtaacacaacaggacgtccaattgtacctcaatgttgttatggattctgt
attgacctacttatcaagttggctggaaccatgaactttacctatgaagtacacctggtg
gctgatgggaaatttggaacacaggagcgggtgaacaacagcaacaagaaagagtggaat
ggcatgatgggagagctcctggggggtctggcagatatgatcgttgccccgctgacaata
aacaacgaacgagcccagtacatcgaattctccaaaccttttaagtaccaaggcctaacc
atccttgttaaaaaggaaatccctcgcagtacactggactcgttcatgcagccgtttcag
agcacactgtggctgctggtgggtctttcggtgcatgtggtggcggtgatgctttaccta
ctagaccggttcagcccgtttgggaggtttaaagtaaacagtgaagaagaagaagaagac
gccctcaccttgtcgtcagccatgtggttctcctggggagtgttgcttaactccggtatt
ggagaaggcgcgccgcgcagcttctcagcgagaatcttgggcatggtgtgggccggcttt
gccatgatcatagtggcatcgtatactgccaacctggctgccttcctggtgctggaccgg
cctgaggagcgcatcaccggcatcaacgacccgaggctgaggaacccatcagacaagttc
atctatgccacagtgaagcagagctctgtggacatctacttccggcggcaggtggagctt
agcaccatgtaccgccacatggagaagcacaactacgagagtgccgctgaggctatccag
gccgtgcgcgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaa
gcctcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggc
ataggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttcc
catgagaatggcttcatggaagatctagataaaacctgggtgagataccaggagtgtgac
tcacggagcaatgccccagccacactcacctttgagaacatggcaggagtgttcatgctg
gtggctggaggcatagcagcagggatcttcctcatctttattgagatcgcctacaagcga
cacaaagacgcccgaaggaagcagatgcagctggcctttgcggccgtcaacgtctggagg
aagaacctgcagccctcttcctctctagagactcaggatgataggaaaagtggtagagca
gagccccccgaccccaaaaagaaagcctcttttaggtccatcagtacctccctggcctcc
agcatcaagagacgtaggtcatccaaagacacgcagtacccacccaccgacatcacgggc
cagctcaacctgtccgacccgtctgtcagcacggtggtgtga
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