Oncorhynchus mykiss (rainbow trout): 110510546
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Entry
110510546 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110510546
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110510546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110510546
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110510546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
110510546
NCBI-ProteinID:
XP_036807980
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All DBs
Position
18:complement(17719504..17815003)
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AA seq
1441 aa
AA seq
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MEYLYLLGRWMCNYFIPRRIRPSPFFTGRFIPLLVFLHSFVFHPDPCLSHPQPCHILARI
GHTVRLGALLPTRQPARVHNALNRALTSLKHRAGEGNPPLLPYNLTLEVVSRSPSGGDPV
SLSRCVCQELVVRGVTGVLAFPRSPEELIHIDFLSSFLEIPFISLLEDLEPLRVKNRFHL
QMSVRVPPSCLANLLLSVLQGVEGETEGEGRREGGGKGQEGGRGGVAVVCPGWEERGEGL
LKHLETQKATSWNLLDIINLTHIGGEERREERGKEERREERGKEERREERGEEGRGAERS
EETGDETREDKREAEVLSLLSRRLLRSASPLSSVVILGSDPECLSSVLRCAQRLAPSLPA
LQWIMGNPLSPDSLLSLGGPLGLLAYGEVGRKPITFYIRDALRLIGQAVTSASEVRPDLA
LIQNLVNCYDKPNKEEVPSSGQYLARFLSNTSFQGSTGTVRVAPALSQVLSSQLYHVWSL
KRGPLGQPSWVTVAHWTTGRLQLDEGVLGLGVGAGLGLGPGRRTGSGSGLGVQRGDRDRD
NSPGGRWRPGLQMAGRRLRVVTLVEHPFVFTREVDEDGLCPAGQLCLDPRTNRSDLLDSL
FSHLHQTNTTTTTTDHNPTEDQRKCCYGYVIDLLEKLSEDLKFTFDLYIVGDGKYGAMSS
TGSWSGLVGDLLSGTADMAVTSFSINSARSRVIDFTSPFYSTSLGILVRSQDTSAPIGAF
MWPLHWSMWVGIFVTLHLTALFLTVYEWNSPFGMTPHGRNRLRVFSYSSALNLCYAILFG
RTVATKTPKCWTSRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEQVSGIHDEKLHHPS
RGFRFGTVRESSAEDYMRKSFHAMHDYMRRYNQPTTPDGVDMLKTDPPLLDAFIMDKALL
DYEVSIDAECKLATVGKPFAIEGYGIGVAQGSPLTANVSEFISRYKSEGYMDILHEKWYK
VVPCGKRVFTNTENLSMGIDHFSGLFVMLCVGVVGAIFTLAAEHTFYHLALPRLRRSHTL
TYWLHTSQKIHRALNTPYEDVGKELIGLDHNPSPCVSDSCSLHRHQQPRPPPPPSSPLPA
PPPPQPSSPARDIKENKRVHFDLESLHSYRLHTHTASFWGRPGMVGRHGLGGCLGGLSPP
QVSLHANGGPASALASPGLALPPLGNPGNQAFLWEGELQEVQGRIETFTAQLRDAVARRA
EIQTCLENHKMNQSTATAVKLEKDKVGQSQSLERVRTNAEKDRTKEEREGLNQEKGMSGR
SNLCSSLDRDRDRDRTSRDSSTVRQTARQDTDRDRLLHQSETERDRDDQSKSLGGNGSSQ
SHASNILQTGRNSQSEALNILQRRREIQSKTSASLDRGTTNQSGAVNTLQGERTVQSCNS
TSLERGRARQSGAVKDQEKGRTVQTRTGASLDRLRAIQSSACTGNLVRERPAPVDTQKSL
C
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggagtatttgtatctacttggtcgatggatgtgcaactactttatacccaggagaatt
cgcccatctccttttttcactgggagatttatcccgctgttggtcttcctccatagcttc
gttttccatcccgatccgtgcctctcccacccccagccatgtcacatcctggctcggatc
ggacacacggttcgtctcggtgctctgcttcccaccagacaaccagccagggtacataac
gctctgaacagagccttgaccagcctgaagcaccgggctggagaaggcaacccgcctctt
ctgccctacaacctcaccctggaggtggtgtctcggtccccgtctggtggcgaccctgtc
tccctgtccaggtgtgtgtgtcaggagctggttgtgcgaggggtgacaggtgtcctggcc
ttccctcgttcaccagaggaactcatccacatcgacttcctgtcctccttcctggaaata
ccttttatatcactactggaggatctagaaccactcagagttaagaaccggttccatctc
caaatgtcagttcgtgttccaccctcttgcctggccaaccttctgctctctgttctccag
ggggtagagggggagacagagggtgaagggagaagagaggggggaggcaagggtcaggaa
gggggtagagggggagttgctgtggtgtgtcctggatgggaggagaggggggagggacta
ctgaaacatctagagacacagaaagcaacaagctggaatctactggatatcatcaacctt
acacatataggaggggaggagaggagggaggagagaggaaaggaggagaggagggaggag
agagggaaggaggagaggagggaggagagaggggaggagggaagaggggctgagagaagt
gaagaaacaggtgatgagaccagagaagacaagagggaagctgaggtcttgtctctcctc
tcccgtcgtcttcttcgctccgcctctcctctctcctccgtggtcatccttggttccgac
ccagaatgtctctcttctgtcctccgctgcgcccagcgtctcgctccctcgctccccgcg
ctgcagtggattatgggtaaccctctgtcacctgactctctcctctcgctgggcgggccc
ctcggcctattggcttatggagaggtgggtcgtaagcccatcaccttctacatccgagac
gcgctgcggttgattggccaggcggtgacgtcggccagtgaggtgaggccagacctggct
ctgatccagaacctggtcaactgttacgacaaacctaacaaagaggaagtgccctcttct
ggacagtacctggccaggttcctctccaacacgtcattccagggttctacaggcacggtc
cgtgtggcacctgctctctcacaggtcctctcctcccagctgtaccacgtgtggagcctg
aagagaggtcctcttggccagccgtcctgggtcaccgtggcccactggaccaccgggcgc
ctacagctggacgagggggtgttggggctgggggtcggggctggcctggggctaggcccg
gggaggaggacagggtccgggtctgggttaggtgtccagagaggggatagggacagagac
aacagtcctggagggagatggaggccggggctacagatggcgggccggagattaagggtc
gtgaccctggtggagcatcccttcgtgttcactagagaggtggatgaggatgggctgtgt
cccgctggtcagctgtgtctggaccctagaactaaccgctcagatctactggactcactg
ttcagtcacctgcaccagaccaatacaaccactaccactactgaccacaacccaacagag
gaccagcggaagtgttgctatggttacgttattgacctgttggagaagctgtcggaggac
ctgaagttcacctttgacctttacatcgtgggagacgggaagtacggagcgatgagcagc
actgggagttggtccggtctggtgggagacctgctgagtggaacagcagacatggctgtg
acatcattctccatcaactcagccaggagcagagttatagacttcacctctccattctac
tctacctctctggggatactggtgcgtagccaagacacatcagcccctattggagccttc
atgtggcctctccattggtccatgtgggtgggcatcttcgtcactcttcatcttaccgca
cttttcctcaccgtctatgagtggaacagcccctttggtatgactcctcatggcaggaac
agactcagagtgttctcctactcctcagccctcaacctctgctacgccatcctgtttgga
cgcactgtcgctactaagactcctaagtgttggaccagtaggttcctgatgaacctgtgg
gccatcttctgtctgttggtgttgtccagttatacagctaacctggctgctgtcatggtg
ggggagaaaacctttgaacaggtgtctgggattcatgacgagaagctgcaccacccatcc
cgtgggttcaggtttgggacagtcagagagagctctgcagaggactacatgaggaagagt
ttccatgctatgcatgactacatgagacgttacaaccaacccaccacaccagacggagtg
gacatgttaaagacagatcctcccctactagatgccttcatcatggataaagctctattg
gactatgaagtctccatcgatgctgagtgtaaactagcgactgtgggcaagcctttcgct
atagaggggtatggtataggtgttgcccaaggctctcctctcactgccaacgtgtctgaa
ttcatcagtcgctacaagtcagaagggtacatggacatattacatgagaaatggtacaag
gtggtgccatgtgggaagcgagtgttcactaacactgagaatttatcgatggggatagat
catttctcaggcctgtttgtgatgttgtgtgtgggggtggttggagccatctttaccttg
gcagctgaacacaccttctatcacctagccctgccccggctacgacggtcacacacactc
acctactggttgcataccagccagaagatccatcgagccctgaacaccccttacgaggac
gtagggaaagagttgattggcctggaccacaatccctccccttgtgtctctgacagctgc
agcctccacagacaccagcagccccgccctcctcctcccccgtcttcccccctgcctgcc
ccccctcctcctcagccctcctctcctgcccgggacatcaaggagaacaagagggtccac
tttgatctggagagtctacacagctaccgtctacacacacacaccgcctcgttctgggga
cgtcctggcatggtggggcgacacggcctgggagggtgtctgggtggtttatctcctcct
caggttagcctgcatgctaacggtggcccagcatcggccctggcctcccccggcctggcc
ctgcctcctctggggaacccaggcaaccaggccttcctatgggagggagagctccaggag
gtccaggggaggatcgagacgttcacagcccagctaagagatgccgtggccaggagggcc
gagatacagacctgcctggagaaccataaaatgaaccagagcacagctactgctgtcaaa
ctggagaaagacaaggttggccagtcacaaagcctggagagagtgagaaccaacgcagag
aaagatagaaccaaggaagagagagaggggctcaaccaggagaaagggatgagtggcaga
tcaaacctctgtagcagcctggacagagacagagacagagacaggacaagcagggacagt
tccactgtgagacaaacagccagacaggacacagacagggacagactgttacaccaatca
gaaactgagagagacagagacgaccaatcaaaaagcctgggcggaaatgggagcagccaa
tcacatgcctccaacattctgcagacagggaggaacagccaatcagaagctctgaacatc
ctacagaggaggagagagatccaatcaaaaacctctgccagcctggacagagggacaacc
aaccaatcaggtgctgtcaatacactgcagggagaaagaactgtccaatcatgtaactcc
accagtctggagagaggaagagccaggcaatcaggtgcagtgaaagaccaggagaagggg
agaactgtccaaacacggacaggggctagtctggacagactgagagctatccaatccagt
gcctgcactgggaatctggttagagaacgtcccgcccctgtggacacccagaagagtttg
tgttag
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