Oncorhynchus mykiss (rainbow trout): 110516086
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Entry
110516086 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110516086
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110516086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110516086
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110516086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
110516086
NCBI-ProteinID:
XP_036828782
LinkDB
All DBs
Position
Unknown
AA seq
1516 aa
AA seq
DB search
MKCLNMSVGRGLTLAFPALLCSLVTLVTLVMEVEGQKVPILNIAVILGRTRYISDRDIRA
LWSKDDPMDVNVVTVLVNETDPKSIITHVCDLMSGTKIHGVVFGDGTDQEAIAQILDFIS
SQTLIPILGIHGGSSMIMADKDDKSTFFQFGASIQQEALLMLSIMEEYDWHIFSIVTSKF
PGYQEFINVLKSTVDNSFVGWDLQHIITLDAVEEDSKSQIMLKKVQSPVVLLYCSKDEGV
FILEEARSLGLTGFGYIWIVSSLTSGTTETVPEEFPSGMVSVSSEDWDYPLEARVRDGLG
IITSAASAMLEEYGEIPEARTSCYGTQPEKPSKVPPLALHKYMKNVTWEGRDLSFTEDGY
QQNPKLVVIVLNKEREWEKMGRLDNRSLTLKYHVWPRFNSFGDAETDDNHLSIVTLEEKP
FVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFTY
DLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISV
MVSRSNGTVSPSAFLEPFSATVWIMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGRDPH
GPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQ
EEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERNIRKNYPNMHEYLSKYHQTGVQD
ALVSLKTGKLDAFIYDAAVLNYAAGRDEGCKLVTIGSGYIFATTGYGIALHKGSYWKRQV
DLAILAIIGDGEMEELEAQWLTGICHHEKNEVMSSQLDIDNMAGVFYMLATAMGLSLITF
ISEHLFYWRLRYCFTGVCTGTPGLLFSISRGIWSCIHGVHIDMKKKSELDFSPQANMLKL
IKSAKQMTNMSNLSTSRINSPKRAAEFMHSAGPMIMDMMAEKGNFIYADNRSYAPKEVIY
GDTGDLQAYLANRHKDHLNNYIFQGGQHPLTLNESNPNSVEVAVSADAAQTNAKPRGLWK
KSVDTMRQGPGVPGPDMLSPDPRISMKTQRYLPEEAAHSDISDCSSRGGGGSYQDPENNK
HLKNKDGLKKRQLPSKYPRDCSEVELSYLKTKQGSGGGGGVGGQGQGQIYTIDSDRELNL
NSDPLHYRESRGLAADDLDYPEIYSDHNDNYRKCQDQPIIHLNSSPLHHADVDLLPDSTY
SKHYGVKDKSLSLSPHETNDRSKQTHCRSCLSKFPASSSYTPGHYTPTNTASVAAAAAAA
AARSPYNRCEACLHTANLYDISEDQLLQDALLTNQGMHQHQDEMFGHYWPQTDGPHVQKR
NRLRMSRQHSFDNIMLEKPKEIDLGRPARSVSLKEKDRCFLDDSPYANLFSVRQADKLLG
SRSMLFNLEENKRSKSLYPEHGSDNPFMASSLRDDTRLVHGRSSSDIYKQLGGGGGLKTS
QRNENNLRSSVKSAASYCSRDGGRIPANDMYITEHVMPYVANKTSSYSAAPRGVLNSAQF
SNRRVYKKIPSLESDV
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctcaacatgtcagtgggcagggggctgaccctggccttcccagctctcctg
tgttccctggtgaccctggtgaccctggtcatggaggtcgaaggtcagaaggtccccatc
ctcaacatcgctgtgatcctgggccgtacgcgctacatctccgaccgggacattcgggct
ctctggagcaaagacgaccccatggacgtcaacgtggtcaccgtattggtcaacgagact
gaccccaagagtatcatcacccacgtgtgcgacctgatgtctgggaccaagatccacggg
gtggtgttcggagacgggacggaccaggaggccatcgctcagatattggattttatttcc
tcccagacactgatccccatcctgggcatccacgggggatcctccatgatcatggctgat
aaggacgacaagtcaacgtttttccagttcggagcttccatccagcaggaggcgctgttg
atgttgagcatcatggaggagtacgactggcacatcttttccatagtcacctccaagttc
cccggataccaggagtttatcaacgtcctcaagagcaccgtggacaacagttttgtaggc
tgggacctgcagcacatcataacattagatgctgtggaggaagacagtaagagtcagatc
atgttgaagaaggtccaatccccggtggttctgttgtactgctctaaagacgagggagtc
tttatcctggaggaggctcgctccctgggcctcaccgggttcggatacatctggatcgtc
tccagcctgacctccggcaccaccgagacggtacccgaggagttcccctcgggcatggtg
tccgtctcctctgaggactgggactaccctctggaggcgcgggtgagggacgggctgggc
atcatcacgtccgctgcctccgccatgctggaggagtacggcgaaatacctgaagcgagg
acttcctgttacgggacacagccggagaagccttccaaggttcctcctctcgctctgcac
aagtatatgaagaatgtaacatgggaaggtagagacttgtcgtttacagaagatggttac
cagcagaaccccaagctggtcgtcatcgttctcaataaggaacgagaatgggagaagatg
ggtcgtttggacaaccgtagcctgacgttgaagtaccacgtgtggccgcgcttcaactcg
ttcggcgacgcggagacggatgacaaccatctgtccatcgtgactctggaggagaaaccc
ttcgtcatcgtcgaagacgtggagaggctcactggaacttgtatgaggaattctgttccc
tgtaggaagcacatcaaggacaacaccacagaggcgggcgggacctacattaaaaagtgc
tgtaaaggattctgcatcgacatcctgaagaagatcgcgaagtacgtgaagttcacctac
gatctctacctggttaccaacggtaaacatgggaagaagatcaacaacgtgtggaacggg
atggtgggagaggtggtctataagaaagctgtcatggccgtcggctctctgacgatcaat
gaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaaactggaataagcgtc
atggtctcccgtagcaacggaaccgtctccccgtccgccttccttgagccattcagtgcg
acggtgtggatcatgatgtttgtgatgctgttgttggtaacagcgatggctgtgttcatg
tttgaatacatcagccctctgggctttaacaggaacctggcacaggggagagacccccac
ggcccatcgttcactatgggtaaggcggtgtggctgctgtggggtctggtgttcaacaac
tctgtcccggttcagaaccctaaaggcaccaccagtaagttcatagtgtcggtgtgggcc
ttcttcgccgtcatcttcctggcctcctacacagccaacctggctgccttcatgatccag
gaggagtttgtagaccaggtcacgggactgtctgacaacaagttccagaacccgtatgcg
tactcccctccgttccgttttgggacggtccccaacggttcgacagagaggaacatcagg
aagaattaccctaacatgcacgagtacctgtccaagtaccaccagacaggggttcaggac
gctctggtcagcctgaagacgggtaaactggatgccttcatctacgatgctgctgtgttg
aactatgcagcgggtcgagacgagggctgtaagctggtcaccatcggcagcgggtacatc
ttcgccaccaccggctacggcatcgctctgcataaagggtcctactggaaacgccaggtg
gacctggctatactggctattataggagacggtgagatggaggagctggaagctcagtgg
ctaacggggatctgtcaccatgagaagaacgaggtgatgtccagtcagctggacatcgac
aacatggccggagtgttttacatgctggctaccgcaatgggactgtctctcattaccttc
atatcagagcatctcttctactggaggttgagatactgtttcactggagtctgtacggga
acaccaggactactgttctctataagcagggggatttggagttgtatccacggcgtccac
atcgacatgaagaagaagtccgagctggattttagccctcaggctaacatgttgaagctc
atcaagtcagccaaacagatgaccaacatgtccaacctgtctacgtccaggatcaattcc
cccaagcgggcggctgagttcatgcactcggcggggcccatgatcatggatatgatggct
gagaaaggtaacttcatctacgccgacaatcgaagctacgcccctaaagaggtgatctac
ggcgatacgggcgacctccaggcgtacctggccaaccgacacaaagaccacctgaacaac
tacatcttccaaggaggacagcaccctctgaccctcaacgagtcaaacccaaactctgtg
gaagtggcggtgagcgcggacgccgcccagaccaacgccaaacccagaggcctgtggaag
aagtccgtggacacaatgcggcagggtccaggtgtccccggccccgacatgctgtccccc
gaccctcgcatctccatgaagacacagcgataccttccggaggaagcagctcactcagac
atctctgactgctccagccgaggaggaggcggttcgtaccaggacccggaaaacaacaag
cacctgaagaacaaggacggattaaaaaaaagacagttgccgtcaaaataccctagggac
tgcagcgaagtggagctgtcctacttaaagactaagcagggcagcggagggggtggagga
gtgggaggacagggacaaggacagatctacaccatagactcagatagagaactcaatctc
aactccgatcctttacactaccgcgagagtcgaggcctggccgccgacgacctggactac
ccggagatctactctgaccacaacgacaactacaggaagtgtcaggatcagccaatcatc
cacctcaactcgtccccgctgcaccacgccgacgtcgacctgctcccggactccacttac
tccaaacactacggcgtgaaggataagagcttgtccctgtcgccccacgagaccaacgac
cgttccaaacagacccactgccgctcctgtctgtccaagttccctgccagtagcagctac
accccgggtcactacacgcccacaaacaccgcttctgttgccgccgccgcagccgccgcc
gccgcccgctcgccctacaaccgctgcgaagcgtgcctccacactgctaacctctacgac
atcagcgaagaccagctgctccaggacgccctgctgaccaaccagggaatgcatcaacat
caggacgagatgttcggccactactggcctcagacggacggtccgcacgtccagaagaga
aatcggctgcgtatgtcccgccaacactcgttcgacaacatcatgctggagaagcctaaa
gaaatagatctgggtcgtccggctcgctccgtcagcctcaaagagaaagaccgctgcttc
ctggacgattctccctacgccaacctgttcagcgtccgccaggccgacaagctgttgggc
tccaggtcgatgctgttcaacctggaggagaacaaacggagcaagtcgctgtaccccgaa
cacggctctgacaaccccttcatggcgtcttcgctgagggacgacacgcgcctcgtccac
ggacgcagctcctccgacatttacaaacagctgggaggaggaggagggctcaaaacatcg
caacgcaacgaaaacaatctgagatcctcggtcaaatccgccgcttcctactgctcccgg
gacggaggacggataccagccaatgacatgtacattacagagcatgtgatgccttatgta
gccaataagacaagttcttactcagccgcaccgcgaggggtactaaactcagcccagttc
agcaatagacgggtttataagaagatacccagtctggagtcagacgtttaa
DBGET
integrated database retrieval system
