Oncorhynchus mykiss (rainbow trout): 110527420
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Entry
110527420 CDS
T07259
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110527420
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110527420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
ATP-synt_B
SieB
Motif
Other DBs
NCBI-GeneID:
110527420
NCBI-ProteinID:
XP_036838738
LinkDB
All DBs
Position
7:complement(17755326..17803651)
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AA seq
2021 aa
AA seq
DB search
MAQLLVPPGPDSFCHFCPDSLAAIERRVAEEETGRPRVDRCSDSDDNGPKPNSDLEAGKS
LPFIYGDVPQGFVSTPLEDLDPFYSNQKTFIVLNRDKAIFRFNATPACYILSPFNPLRRI
AIAVLVHSLFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFCV
GKFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLVNDTIPDNHLNRTLGTPNI
NGTDFNGTDFNVTRSVNWTEYINDESNYYYLLNRRDALLCGNGSGAGLCPEGFTCIKAGR
NPDYDYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMMFFVLVIFLGSFYLVN
LILAVVAMAYDEQNQATIEEAAQKEEEFQAMLEQLKRQQEEALVAAAATTESHEEYSGRG
GPSSEASSGTSKLSSKSAKERMNRQKKRKERGEHEKFHKSESEDSIKRLSFRFSIDANRL
SYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDVSDNDFADDEQSTFEDTDSR
RGSLFVPCRAERRSSTVSQTSLAPQRVLLPANGKMHCTVDCNGVVSLVGGTSVPTSPVGL
LLPEGTTTDSEMRLKKRRSRQSSMAYLDEPARARAMSVASILTNTMEELEESRQKCPPCW
YKFANTYLIWDCCPMWLSFKGIVNTVVMDPFVDLAITVCIVLNTLFMAMEHYPMTTEFNH
VLSVGNLVFTGIFTAEMCFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEGLSVL
RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE
CVCKIADNCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFLMVMVI
GNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWVKVTIRQVIQSLF
LGGGASKGVKEGSLEEGKTLDELHSSINGKGGNCISNHTLVEISKDPSGVYLKEGNGRPG
GGLGVGLGDSTENYPKEECNYMSFIHNPSLTVSVPIAVCESDFETAITEDFSSDSASEEM
SLGSKEKLPVESRQPTSSEGSSVDIGPPGDGAESVELEDEESEDPENCFTDGCVLRFQCC
QVNVEQGKWKVWWTLRKTCFIIVEHNWFETLIIFMILLSSGALAFEDIYIEQRKTIKIVL
EYADKVFTYIFILEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAI
KSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK
YYHCVNTTNDETFPIEVVNNKSDCLALANDSARWKNVKINFDNVGAGYLALLQVATFKGW
MDIMYAAVDSRNVELQPQYEQNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFVTKQAFDIVIMILICLN
MVTMMVEEDDQTPEREKILHWINFVFIVLFTGECTLKMISLRHYYFTIGWNVFDFVVVIL
SIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYAIFGMSNFAYVKHEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPIL
NKKEPDCDSQMEHPGTLYRGNCGNPPVAMFFFVSYIIICFLIVVNMYIAVILENFSVATE
ESAEPLSEDDFEMFYEVWERFDPDATQFVEYDKLSDFADALDPPLRMAKPNHIQLIKMDL
PMVSGERIHCLDILFAFTKRVLGEGEGLDLLRGQMEERFMASNPSKVSYEPITSTLRRKQ
EDMSAVVIQRSFRRYLARLALKKAAELYKEQPKGSMMCELEDKEVLVIGKFADNSTSTEK
MDMTSSTASLPSYNSATKSEKDKYEKEQREKEDREKDLRGK
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccacttctgtcccgactcg
cttgccgccatcgaaaggcgcgtcgccgaggaggagaccgggagaccccgcgttgaccgc
tgtagcgacagcgatgacaacgggcccaagcccaacagcgacctggaggcagggaagtcc
ctccccttcatctacggtgacgtcccccaaggctttgtctccacccctctggaggacctg
gaccccttctactccaatcagaagacatttatagtgttgaatcgcgacaaggcaatattc
cgtttcaacgccactcctgcctgttacatcctaagccccttcaatcctctacggagaata
gcaattgcagttttagtacactcgttgttcagcatgttaatcatgttcaccattttgacc
aactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtacacg
ttcacagggatttacacattcgagtctctcattaaaatcttggcgagggggttctgtgtg
gggaagttcaccttcctcagggatccatggaactggttggacttcatggtaatctccatg
gcatatgtgacagagtttgtggacctgggtaatgtctcggccctcagaaccttcagggtt
ctccgagcgctcaaaactatatcagtcatcccaggactaaagaccatcgtgggtgctctg
atccagtcggtcaagaagctctccgacgtcatgatcctcaccgttttctgtctcagcgtc
ttcgccctgattggcctgcagctcttcatgggaaacctgaggcagaagtgtatccgcaac
ctcgtcaatgacacgatccccgacaaccacctgaacagaactctgggaactccaaacata
aatggaacggatttcaatggcactgatttcaacgtcactcgctccgtaaactggactgag
tacatcaacgatgagagtaattactattacctcctcaaccgcagggacgccctcctctgt
gggaatggcagtggagccgggctctgcccagagggattcacgtgcattaaggcaggcagg
aacccagactacgactacacaagcttcgactcgtttggctgggccttcctgtccctgttc
agactcatgacacaggacttctgggaaaacctctaccaacagaccctgcgagcggcgggg
aagccctacatgatgttctttgtgttggtgatcttcctgggttccttctacctggtcaac
ctgatcctggctgtggtggccatggcctacgacgagcagaaccaggccaccatagaggag
gcagcccagaaggaggaggagttccaggccatgctggagcagctcaagagacaacaggag
gaggcattggttgccgcggcagcaaccacagagagccacgaagagtacagcgggagaggg
gggccctcctcagaagcctcctcagggacctccaaactcagctccaagagtgccaaggag
agaatgaaccgtcagaagaagagaaaagagaggggcgagcacgagaagttccacaagtcc
gagtcagaggacagtatcaagaggttaagcttccggttttcgatagatgccaaccggctg
tcctacgagaagagatgctcctcacccaaccagtctctcctcagtatccgcggctccctc
ttctccccgaggaggaacagccgagctagcctgtttagcttccgaggccgcgcccgcgat
gtctccgataatgacttcgccgacgacgagcaaagcacgttcgaggacacggacagccgc
cgcggctccttgttcgtgccttgccgtgccgagcgccgctccagcacggtcagtcagact
agcctggcccctcagcgcgtcctgctgcccgccaacggcaagatgcactgcaccgtggac
tgtaacggcgtcgtctcgctagtgggagggacctcggtgcccacctcgcctgtaggactg
ctcctgcctgaggggacgaccactgactctgagatgaggctgaagaagaggaggtctcgc
cagtcttccatggcctacctagatgagccagccagagccagagctatgagtgtggccagt
attctcaccaacaccatggaggagcttgaagagtccaggcagaagtgtccaccatgctgg
tataagtttgccaacacctatctgatctgggactgctgtcctatgtggttgagtttcaag
gggatcgtcaacacggtggtgatggaccccttcgtggacctggccatcaccgtctgcatc
gtactcaacaccctgttcatggccatggaacattatcccatgaccacggagttcaaccac
gtcctctctgtcgggaacttggtgttcacgggcatcttcacggctgagatgtgtttcaag
ctaatcgctctggacccctactactactttcaacagggatggaacatatttgacggcatc
atcgtcagtctgagtctgatggagctcggcctggccaatgtagagggcctgtctgtgctc
cggtctttccgattgttgagggtgttcaaactggccaagtcttggcccaccctgaacatg
ctgatcaagatcatcggtaactcggtgggagcgctgggtaacttgacactggtcctagcc
atcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaagagctacaaggag
tgtgtgtgtaagatcgcagacaactgccagctgccccgctggcacatgcacgacttcttc
cactcgttcctcatcgtgttccgagtgctgtgcggggagtggatcgagaccatgtgggac
tgtatggaggtggctggccagagcatgtgtctcatcgtcttcctgatggtcatggttata
gggaacctggtggtcctgaatctgttcctggccctgctgctcagctcctttagcgccgac
aacctggcggccacagacgacgacagcgagatgaacaacctgcagatcgctgtgggccgc
atccagaggggcgtggcctgggtcaaggtgaccatccgacaggtcattcagagcctgttc
ctcgggggcggagccagcaaaggggtcaaggaggggtcactggaggagggcaagaccctg
gacgagctccacagctccatcaacggcaaggggggcaactgcatctcaaatcacacgttg
gtcgagatcagtaaagatccgagtggggtctatctgaaggaggggaacgggcggcccgga
ggggggctgggggtggggttaggagacagtacggagaattacccgaaggaggagtgcaac
tacatgtcgttcatccacaaccccagccttacggtgagtgttcccatcgcggtgtgcgag
tcagactttgagaccgctatcacggaggacttcagcagcgactcggcctccgaggaaatg
tcgttgggcagcaaagagaagctacctgtagagtcccggcaacctacctcgtcggagggc
agctcggtggatatcgggcccccgggggatggagctgagtcagtggagctggaggacgag
gagtcagaggacccagagaactgcttcactgatggctgtgtgctcaggttccagtgttgc
caggtcaacgttgagcagggcaagtggaaggtgtggtggaccttgaggaagacgtgtttc
atcatcgtggaacacaactggttcgagaccttaatcattttcatgatcctgctcagcagt
ggcgctctggcgtttgaagacatttacatagagcagaggaagaccattaagatagtgctg
gagtacgcagacaaagtcttcacttatatcttcatcctggagatgctgctgaagtgggtg
gcctacggattcaagaagtacttcaccaacgcctggtgttggctggacttcctcattgtt
gatgtgtctctggtgagcttggtagccaatgcgttaggctactctgagctgagtgccatc
aagtccctacgaacactgcgggccttaagacccctgagggccttgtcacggttcgagggc
atgagggtggtggtgaacgccctcctgggtgccattccgtccatcatgaacgtgctgctg
gtgtgtctcatcttctggctcatcttcagcatcatgggcgtcaatctgttcgcagggaag
tactatcactgcgtcaacaccaccaacgacgagacctttcccatcgaggtggtcaacaac
aagagcgactgtctggccctggccaatgacagcgcccgatggaagaatgtcaagatcaac
tttgataatgtcggggccgggtacttggccttgttgcaagtggcaacgttcaaaggttgg
atggacatcatgtacgcagctgtggactctcgtaatgtggaacttcagccccaatatgaa
cagaacctctacatgtatctgtacttcgtcatcttcatcatctttggctccttcttcact
ctcaacctcttcattggtgtcatcattgacaacttcaaccaacagaagaaaaagtttgga
ggtcaggacatcttcatgacagaggaacagaagaagtactacaatgccatgaagaagctc
ggctccaagaagccccagaagcctattcccaggccaacgaatgcattccaaggctgtgtg
tttgacttcgtaactaagcaggctttcgacattgtcatcatgatcctcatctgcctcaac
atggttactatgatggtggaagaggatgaccagacaccagagagggaaaaaatcctccac
tggattaactttgtctttatagtgctcttcactggggagtgtacgctcaaaatgatatcc
ctccgccattactacttcaccattggctggaacgtgtttgactttgtcgttgtcatcctt
tcaatcgtaggtatgtttttatcagaattgattgagaagtactttgtttccccaacgtta
ttccgagtcatccgacttgccagaatcggccgcatcctccgtctcatcaagggcgccaag
ggcatccggacgcttttgttcgccttgatgatgtcacttcctgccctgtttaacattggc
ctcctgctcttcctggtcatgttcatctacgccatcttcggcatgtccaacttcgcctac
gtcaagcacgaggcgggaatcgacgacatgttcaacttcgagacgttcggcaacagcatg
ctctgcctgttccagatcaccacgtcagcgggctgggacggcctcctggcgcccatcctc
aacaagaaggagcccgactgtgacagccagatggagcacccgggcaccttgtaccgggga
aactgcggcaacccgccagtggccatgttctttttcgtcagctacatcatcatctgtttc
ctcatcgtggtcaacatgtacatcgctgtcatcctggagaacttcagcgtggccaccgag
gagtcggccgagccgctgagcgaggacgactttgagatgttctacgaggtgtgggagcgc
ttcgacccggacgccacgcagttcgtggagtacgacaagctgtcggactttgcagacgct
ttggacccaccgctgcgaatggccaagcccaaccacatccagctgatcaaaatggatctg
cccatggtcagcggggagcgcatccactgccttgacatcctgtttgccttcaccaagcgt
gtcctgggagaaggcgaaggcttggacctcctccggggccagatggaggagcgcttcatg
gcctccaatccctccaaagtatcctacgaacccatcaccagtaccttgcggcgcaagcag
gaagacatgtctgccgtggtgatccagaggtccttcaggcgctacctggcccgactcgcc
ctgaagaaagcagcagagctctacaaggagcagcctaaaggcagcatgatgtgcgagctg
gaggacaaggaggtgctggtgattgggaagtttgcggacaactccacctccacagagaaa
atggacatgacgtcctccaccgcctcgctgccttcgtacaacagtgccacaaagtcggaa
aaggacaaatatgagaaagaacagagggagaaagaggacagagagaaagatctaagagga
aaataa
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