Oncorhynchus mykiss (rainbow trout): 110527823
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Entry
110527823 CDS
T07259
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00310
Lysine degradation
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110527823 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110527823 (prdm2b)
03036 Chromosome and associated proteins [BR:
omy03036
]
110527823 (prdm2b)
Enzymes [BR:
omy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
110527823 (prdm2b)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110527823 (prdm2b)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110527823 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_11
zf-C2H2_jaz
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
110527823
NCBI-ProteinID:
XP_021465029
Ensembl:
ENSOMYG00000012879
LinkDB
All DBs
Position
7:complement(43831691..43849517)
Genome browser
AA seq
1762 aa
AA seq
DB search
MAVPGGTMETLADIPHHVWKSLPDGLRLSPSAVDQSRIGVWASRSIPKGKRFGPFVGEKK
KRSQVSSNVYMWEVYFPARGWMCVDATDPRKGNWQRYVNWANSTQEQNLFPIEINRAIYY
KVLRPIGPGDELLVWYNGEDNPEITAALEEERGSSLSKKNSPRAKRARRKLLEGARQAGL
GAFRGPKQTGVTKPIVKEMWDTEEGANEEDERLSQSPGPSKGTRESSPMGRNGLSQAQFI
SAAMRGEAEEDDEEEDPGDLQQPLSLTQQCAQSATEAEPEERSEQPDLPLSHSSPVEEGP
GSLQHDTETASSLPRAEPEADPDPDPDLEGDPHGEESHPCQHCERHFSTKQGLERHTHIH
ATANQQTHTFKCRYCGKSFGSQVGRRRHERRHENGPKNKGQRPGSLAGTATLLTPLGQAG
GSSPDCGTVSGHYVVRGSPVPGGPMGSLEVVRKDPAAESDRPFIVDENGETKELHPCKYC
NKAFGTHTNMRRHQRRIHERHLLPKGIRRKGMLLQESPSQQQLHHLPEQSPSVSPPLVYV
PSADTEDEGDREEYLVDIANNISENLSLYIDGKILSTSSVSGCEVIEVDSSSAALFGLDA
VVISPNQISQALKVDTRTCAVRQVSNLGQPMSKRRTSTPPLMPSLKMESETGSSSASSSS
STSSSSALLVGSVFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDSQKPAIALIAERHRLA
PPLSVTSLPAASGRFKRRTASPSSSPQLSPALKANGCKNEAGVSSYTLKVPNLETLGLSP
AWSLSSKEERDTLSPSGKNGCSWSASRTGGNSCNQQPLDLSSGISKRRDSFNKTPGEVVL
DLSMSRKSTAESKGSPSLAQPPTKKKKPNTSMLEKVLMNEYAGLSPAEEEGSSPLGSPDS
QYTAGSGTGTASHSPSSNLPSESAHPSPPSLTPFTMNPSSPCGSSLTSPTPPPPVLPTMP
SPDCPTLISSLPVLSHKMSPRSIDQGEDEPVCVSNSTTAETMLAAVSNSYGDEEHINKPI
DSNPDPLTRKAISSPSTEPSLVSDAVALSLSSTQSKPARTGNQSLLDVQVNQDLEPIITE
GQEKSQCSELPVLSSVTESLLSASSTSPAAISDIPAPPAVSPPSLSSTVIKGDPQHSEQL
ADLVLSPSGTGSSPLSAAADKPSSLSEEEEGSPPELFSKSFVCNVCEDPFRAIKELSRHI
LEHAAEWPYKCEFCVQLFGNAPALLEHRTALHGVGRVFVCSVCSKEFAFLCNLQQHQKDL
HPSQPCTHTAVENGKPRPQNYTDPARAKEESNPSSTVATGPESSPEVASSQGVSDVKKEE
PDTNGKHEEDGLEDLTEELYTTIKIMASEGGKPKGPDVRLGINQHYPSFKPPPFPYHNRT
AAGSVASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKN
PIPLRQIVKPQNGSLSPASAANAGHNAFRRMGQPKRLNFNQEPLGKTKMSSLGKKKSQLV
QKAIGQRNETAATVNKAPSQVKQEEPQEQEVHVCPHCSREFTYPASLSKHIAGSCPMKPV
SKKAKKGAATEATPAVDKNMSLRRRTTDSEIQQPEPAEPVPKTLSKTRARNSGPGPAEAP
QPVGKGKMAATQVCTKRPASFPAATVSLSKKSKKGKVQSLPPTPLPSESPSDSAPRPAAQ
TKQRMGKEVPPKKRAEVKSPPQQQSQVPPKKEGERFSLRARERAVGPVTRSLQMANTAAP
VEVKTDDLSSQEPEETQEYLLK
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctggagggacaatggaaacgcttgctgacattccacatcatgtgtggaag
agcttgcccgatggcctgagactaagcccctctgctgttgatcaaagtcgaattggtgtc
tgggcctctaggtcgattcctaaaggcaagaggttcggtccttttgtaggagagaagaaa
aagcggtcccaggtgtccagcaatgtatacatgtgggaggtgtattttccagcgaggggc
tggatgtgtgtggatgccacagaccccaggaaggggaactggcaacggtatgtaaactgg
gctaactccactcaggaacagaaccttttccccatagagataaaccgagccatttactac
aaagtgttacggccaattgggccaggggatgagctgctggtgtggtacaatggggaagac
aaccctgagataacagctgcactagaggaagaaagaggcagcagtctgagcaagaaaaat
tcacccagggcaaagcgagccagaagaaagctgttggagggagcaagacaggctggtttg
ggtgcattccgtgggcccaagcaaacaggcgtaaccaaacctattgtcaaagagatgtgg
gacacagaggaaggtgcaaatgaggaagacgagagactctcccagtcaccagggccttcc
aaggggactcgggagagctcccccatggggaggaacggcctctctcaagcccagttcatc
tcagcagcaatgagaggggaagcggaggaggatgatgaagaggaagacccaggggatctg
cagcagccgctgtcactgacacagcagtgtgctcagtctgcgactgaagctgagccagag
gagaggagtgagcagcctgatctgccactaagccatagcagcccagttgaggaggggcct
gggagccttcagcatgacactgagactgcctcatccctaccaagggctgaaccagaggca
gaccctgaccccgaccctgacctggaaggtgacccccacggagaggagtcccatccctgc
cagcactgcgagcgccatttctccaccaaacagggcttggagcgccacacacacatccat
gccaccgcaaaccagcaaacgcacacgttcaaatgccgttactgtggcaagtccttcggc
tcgcaggtgggacgtcggcggcacgagcggaggcatgagaacgggccaaaaaacaaaggc
caaaggcctggctcactagctgggactgctactttactcactcctctggggcaggctggt
ggttcgagcccagactgtggcactgtctctggccactacgttgtcaggggctcccctgtc
cctggaggacctatggggagccttgaggttgtgaggaaggaccctgcggctgagagtgac
cggccgtttatcgtggatgagaatggtgagacaaaggagcttcatccctgcaagtactgt
aataaggctttcggcactcacaccaacatgcgcagacaccagcgcagaatccacgagcgc
cacttactgcccaagggtatccgcaggaaaggcatgctgctgcaggagagcccatctcag
cagcagctgcatcatctgcctgaacagtcccctagcgtcagcccacccctcgtctatgtg
cccagtgcagacactgaggatgagggggaccgagaggagtacctggtcgacatagccaat
aacatctcggagaatctcagcctgtacatcgacggcaagatcctgtccactagttcagtc
agtggctgtgaggtgatcgaagtggactccagttctgcagcactgtttggtctcgacgca
gtggtcatcagccccaatcagatcagtcaggctctcaaagtggataccaggacatgtgct
gtgaggcaggtctcgaatctcggccagcccatgtcgaaaaggagaacgtcgacacccccg
ctcatgccaagtcttaaaatggagtctgaaactgggtcctcttccgcctcctcttcctcc
tccacgtcttcctcatccgccttgttggtgggaagtgtcttccctcagtcctcagactca
ttagcatttcaaaaggagaaaactatctatctgtctcctaagctcaaacagctcctccag
actcagacagacagtcagaaacctgccattgccctgatagcagagaggcacagattagct
ccccctctctccgttacgtctctgcctgcagcctcaggcaggttcaagagaagaacagct
tccccctcctcatctccacagctcagccctgcgctgaaagcaaacggctgcaagaacgag
gcgggggtctcgtcgtacaccctcaaggtgccaaatctggagaccctgggcttgtcccct
gcctggagtctgtccagcaaggaggagagggacacactgagtcccagcgggaagaacggg
tgcagctggtctgcctctcggaccggagggaactcttgtaatcagcagcccttggatctg
tccagcggcatcagtaagaggagggacagcttcaacaagacgcccggggaggtagtgctg
gatttaagcatgagtcggaagagtacagcagagtctaagggaagtccatctctggcacag
ccccccaccaagaagaagaagcccaacaccagcatgctagagaaggtgttgatgaacgag
tacgccggcttaagcccagcagaagaggaaggctcttctcccctgggaagcccagattct
caatatactgcaggcagtggtacaggtaccgcatctcacagtccctcttccaatctgccc
tctgaatcagcccatccctctcccccctctctaacgcccttcacgatgaacccctcctcc
ccttgcggctccagcctgacctctccaacgccacctccccctgtcctacccaccatgccc
tcaccagactgccctacgctcatcagctctctccctgtcctctcccacaaaatgtccccc
agatctatcgaccaaggtgaggacgagccagtttgcgtatcgaactctaccacagcagag
acaatgttagctgcagtaagtaacagttatggagatgaggaacatatcaataagccaata
gactctaatccagatccccttaccaggaaagctatttcaagcccctctacggagccctcc
ttggtatctgatgctgtcgctctgagtctgtcctcaacacaatcgaaacctgctaggact
gggaaccaaagtttgctggatgttcaagtgaatcaagacctggaaccgattattactgag
ggacaggagaaatcccaatgctctgaactccctgtattatcatccgtaacagaatccctc
ctctctgcctcatcgacctcgcctgctgccatatcggatatcccagctccacccgctgtc
tccccgccatctctctctagcactgtgattaaaggggatccccagcacagtgaacagctg
gctgacttagtcctttctcctagtggcacagggtcttcacctctgtctgctgctgctgac
aaaccctcgtcgttgtcggaggaggaagagggatcgccgccagagctcttcagtaagagc
tttgtgtgtaatgtatgtgaggaccccttccgcgccatcaaagagctcagtcggcacatc
ctagagcacgccgctgagtggccctacaagtgtgagttctgcgtgcagctgttcgggaac
gcccctgctctgctggagcaccgcacggccctccacggcgtgggacgcgtctttgtctgc
tccgtctgctccaaggagttcgccttcctctgcaacctccagcagcaccagaaggacctg
catcccagccagccgtgcactcacacagcggtggagaacggcaagcccaggccacagaac
tacacagacccagccagggccaaagaggagagtaacccctcctcaaccgtagccacaggg
cctgagtcctctcctgaagttgcttcctcccagggggtctctgatgtgaagaaggaggag
cctgatactaacgggaagcatgaggaggatggactggaggacctaactgaagagctgtac
actactataaagatcatggcctctgagggaggcaagcctaaaggcccagatgtacgcctg
ggcattaatcaacactaccccagtttcaagccaccccccttcccctaccacaaccgcact
gctgcaggctctgtggcctcggccaccaacttcactacccacaacatcccccagacattc
agcactgccatccgctgcaccaaatgcggcaagagtttcgacaacatgcccgagctgcac
aagcacatactagcctgtgccaacgccagtgataagaggcggtacactcccaagaagaac
cccatccctctgagacagatagtgaagccccagaacggctctctgtcgcctgcctctgct
gccaacgcagggcacaacgccttccgcagaatgggccaacccaagaggctcaacttcaac
caagaaccgcttggcaaaaccaagatgagttccctcggtaagaagaagagccagctggtt
cagaaggccatcgggcagaggaatgagactgcagctactgttaacaaggcccctagccag
gttaaacaggaggagccgcaagagcaggaggtccacgtatgccctcactgcagccgagag
ttcacctaccctgccagcctcagtaaacatatagcaggcagctgtcccatgaagccagtc
tctaaaaaggccaaaaagggggccgcaacagaggcaacaccagctgtagacaaaaacatg
agccttcgacggagaaccacagactctgagatccagcagccagaaccggctgagccggtt
cccaaaacgcttagcaaaactcgggctcgcaactctggacctggccctgctgaggcccca
caaccggtgggtaaaggaaagatggctgccacacaggtgtgcaccaagaggccagcctct
ttcccagcagccacagtttctctcagcaagaaaagtaaaaaaggcaaagttcaatcgtta
ccccccaccccgttgccctccgagagtcccagtgactctgcaccgcggccagcagctcag
acaaagcaacgcatgggcaaggaagtgccacccaagaagagagcggaggtgaaatcgccc
ccacagcagcagtctcaggtgccgcctaagaaagaaggggaacggttctctctgagagcg
agggagcgagctgtcgggccggtgacccggagcctacagatggccaacactgcagctcct
gtggaggtgaaaacagatgacctctccagccaggagcctgaagagactcaggagtacttg
ctgaagtga
DBGET
integrated database retrieval system
