Oncorhynchus mykiss (rainbow trout): 110530057
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Entry
110530057 CDS
T07259
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00601
Glycosphingolipid biosynthesis - lacto and neolacto series
omy01100
Metabolic pathways
Module
omy_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
omy_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
110530057
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110530057
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
110530057
Glycosyltransferases [BR:
omy01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
110530057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Orthopox_A43R
Motif
Other DBs
NCBI-GeneID:
110530057
NCBI-ProteinID:
XP_021468518
Ensembl:
ENSOMYG00000001937
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All DBs
Position
8:51728048..51736153
Genome browser
AA seq
387 aa
AA seq
DB search
MFVNFRRIRKCQCVQLMTTCLVLSVVMVCWEQLDSGMVSHINSYSYRYLVNSYTFINKSF
TIPRQEAHMFSNHRYLLNHPYKCSGEKDILLLLLIKSSPENFERRRAIRSTWGNETYIRQ
DLGVTVKVMFVLGLPKQHETAQTWRGRSGGIQDSLVDEDRRHGDMVQQDFVDTFHNLTLK
LLLQFRWAHFYCPHARFLMTADNDIFVHMPNLVRYLQDMDRKGVTDFWIGHVHRGAPPIR
QKESKYYVPQEMYPWASYPDYTAGAGYVVSRDVADKIYQASLTLNASLYIDDVFMGICAN
AMGVSPQEHVYFSGEGKAPYHLCIYDKMMTSHGHVADIYELWAAATNPEVKRVTSGLLGR
LYCTAVKLTLLCRPYFFNTYPCKAALL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaatttccggcggatccgcaagtgccagtgcgtgcagttgatgaccacatgc
ctggtgctgtcggtggtgatggtatgctgggagcagctggacagtggcatggtgagccac
atcaactcctactcttaccgttacctggtcaacagctacactttcatcaacaagagcttc
accatcccacgacaggaggcccacatgttcagtaaccaccgctacctactcaaccaccca
tacaagtgctcaggagagaaggacattttactgcttctgctcatcaagtcctccccggag
aacttcgagagacggcgagccatacggtcgacgtggggcaacgagacctacattcgccaa
gacctgggggtgacggtgaaggtgatgtttgtgctgggccttcccaagcagcatgagact
gcccagacgtggagggggaggagtggaggtatccaggacagcctggtcgatgaggaccgc
aggcatggcgacatggtccagcaggactttgtggacacgttccacaacctcaccctcaag
cttctgctacagttccgctgggctcatttctactgcccgcatgcccgcttcctcatgaca
gctgacaatgatatcttcgtgcacatgcccaacctggtgcgctacctgcaggacatggac
aggaagggcgtgacggacttctggatcggtcacgtgcacagaggcgcgccaccgatccgc
cagaaggaaagcaagtactacgtcccgcaagagatgtacccttgggcgtcatacccggac
tacacggcaggggccggttacgtcgtctcaagagacgtggcggacaaaatctaccaggcc
tcattgacgctcaatgcctcgctgtacattgacgatgtcttcatgggcatctgtgccaat
gccatgggcgtgtcgccacaggaacacgtgtacttctcaggcgaaggcaaggcgccctac
cacttgtgcatctacgacaagatgatgacatcgcacggccatgtggccgacatttatgag
ctctgggcagccgccacaaacccggaggtcaaaagggtcacatcgggacttcttgggagg
ttgtactgcacggcagtgaaactcacccttctgtgcagaccctacttcttcaacacctac
ccctgcaaggcagccttgttgtag
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