Oncorhynchus mykiss (rainbow trout): 110532152
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Entry
110532152 CDS
T07259
Name
(RefSeq) paired box protein Pax-7 isoform X1
KO
K09381
paired box protein 3/7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110532152
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110532152
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
110532152
NCBI-ProteinID:
XP_021471476
Ensembl:
ENSOMYG00000020689
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Position
9:complement(43131367..43198954)
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AA seq
522 aa
AA seq
DB search
MLPTVLHQNCRMQSSLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFING
RPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQ
VATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRARFG
KKDDEEDCDKKDEDGEKKTKHSIDGILGDKGSRMDEGSDVESEPDLPLKRKQRRSRTTFT
AEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN
HLLPGGFPGSGMPTLPTYQLQDSGYPTTTLSQDVSGTVHRPQPLPPSTMHQGGLSGGDGG
SAYGLSSNRHGFSSYSDSFMSPSAPSNHMNPVSNGLSPQVMSILSNPSGVPSQSQHDFSI
SPLHGSLESSNSISASCSQRSSDQSIKTVDSMASSQSYCPPTYSTSSYSVDPVTAGYQYS
QYGQTAVDYLAKNVSLSSQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgctccccactgtgctacatcagaactgtagaatgcagtcgtctttgccaggaacagta
ccgcgaatgatgcgaccagcgcctggacaaaactatccgcgcactggcttccctttggaa
gtgtcaactcccctgggtcaaggtcgggtaaaccaactcggtggagtgttcatcaacgga
agaccactgccaaatcatatccgacacaagatagtggagatggcccaccacggtatccgt
ccctgcgtgatctctcgacagctacgagtttcccatggttgcgtgtccaaaattctttgt
cggtatcaagaaacaggatcaatccgacccggggcaataggaggaagcaaacccagacag
gtagcaacgcccgatgtggagaaacggattgaggagtacaagcgcgagaatcccggcatg
ttcagctgggagatccgagacaagctgctgaaggacggggtgtgtgacagaagcacagtt
ccttcaggtgaggcctcatctgtgagttccattagtcgtgttctgagagctcgatttggg
aagaaagatgatgaagaagattgtgataaaaaagatgaagacggagagaagaaaaccaaa
cacagcatcgatggcattcttggcgataaaggtagccgtatggacgaaggctcagatgtg
gagtcggagccggaccttcccctgaagaggaaacagaggcgcagtcgcaccactttcacg
gccgaacagctggaggagctggagaaggcctttgagaggacacactatcccgacatctac
accagagaagagctggcccagaggaccaagctcacagaggcccgtgtacaggtgtggttc
agcaaccgacgggccaggtggcgtaagcaagcgggagccaatcagctggcggcgttcaat
cacctgttgccgggcggattcccaggcagcggcatgcccacgctacccacctaccagctc
caagattccggttaccctacaaccacactatcacaagacgttagtggcacggttcaccgc
cctcagccattaccaccgtccaccatgcaccagggagggctgtcgggcggggatggcggc
tcggcctacggcctgtcgtccaaccgtcatggcttctccagctactccgactccttcatg
agcccctcggcacccagtaaccacatgaaccccgtcagcaacggcctctccccacaggtg
atgagcatcctgagtaaccccagcggtgtgccctcacagtcccagcatgacttctccatc
tcgcccctccacggcagcctggagtcgtccaactccatctcggccagctgcagccagcgc
tcctcagatcagtccatcaagacggtggacagcatggcctcctcccagtcctactgccct
cccacctacagcaccagcagctacagtgtggaccctgttacggccggctaccagtacagc
caatacggacagactgctgtggactacctggcgaagaacgtgagcctgtccagccagcgg
aggatgaagctgggagaccactcagccgtcctgggactactccaggtggagacgggacag
gcctactag
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