Oncorhynchus mykiss (rainbow trout): 110534396
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Entry
110534396 CDS
T07259
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00052
Galactose metabolism
omy00511
Other glycan degradation
omy00531
Glycosaminoglycan degradation
omy00600
Sphingolipid metabolism
omy00604
Glycosphingolipid biosynthesis - ganglio series
omy01100
Metabolic pathways
omy04142
Lysosome
Module
omy_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
110534396 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
110534396 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
110534396 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
110534396 (glb1)
00511 Other glycan degradation
110534396 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110534396 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110534396 (glb1)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
110534396 (glb1)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110534396 (glb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
YfzA
Motif
Other DBs
NCBI-GeneID:
110534396
NCBI-ProteinID:
XP_021474922
Ensembl:
ENSOMYG00000011162
LinkDB
All DBs
Position
10:complement(59546496..59554607)
Genome browser
AA seq
650 aa
AA seq
DB search
MACSRIGVVLLCSLFASTLGVPQTFSVDYKNDCFRKDGEEFRYISGSIHYNRIPRAYWKD
RLLKMYMAGLNAIQTYVPWNFHEPSPDRYNFSGDRDLEHFLQLAQDIGLLVVLRPGPYIC
GEWDMGGLPAWLLHKKDIVLRSSDPDYIAAVDKWMGTLLPMLKPFLYQNGGPIITVQVEN
EYGSYFACDYNYLRHLTSLFRSHLGNDVVLFTTDGAGAGYLKCGTLQGVYATVDFGPGGN
VSAAFDAQRQAEPHGPLVNSEFYTGWLDHWGERHSTVSTAIVAKSLNEILAIGASVNLYM
FIGGTNFGYWNGANTPYAPQPTSYDYDAPLTEAGDLTDKYFAIQDVIKLYRKIPEGPVLP
STPKYAYGAVPMKKLHTVVDALDILSFSGPVKSIYPLTFIEMNQPFGFVLYQTKLPVDCS
KPTPLSSPLNGVHDRAYVSVDGVAAGILERDKALTINVTGKAGSQVDILVENMGRVNYGK
DINDFKGLVSNLTLGADILTGWEVYSLSIDQAVSQGLLWEMGSRVAGTPPPSPLSVPSFY
GGTFVIPDGIPDLPQDTYIQFPDWRKGQVWINGFNLGRYWPARGPQITLYVPASILSTAV
PNNVTVLELEGDPCTPGPCTVEFTNTPVLNATVKSDHKHQRALFHKEDLL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctcaaggattggagttgtgctactgtgttccctctttgcaagtacacttggt
gtgccgcagaccttcagtgtggactacaagaacgactgcttccgtaaggatggggaagag
ttccgctacatctccggtagcatccactacaacaggatccccagggcctactggaaagac
aggctactcaagatgtatatggccggactgaacgccattcagacgtacgtcccttggaat
ttccacgagccctctccggatcggtacaacttcagtggggacagggatctagaacacttc
ctgcagttggcccaagacattggtctgctggttgtactgaggcctgggccctacatctgt
ggagagtgggatatggggggtttgcctgcctggctgctccacaagaaagacattgtcctg
cgttcctcagacccagattacattgcggctgttgacaagtggatgggcacgctactgcca
atgttgaagccgttcctttatcagaacggtggcccaatcatcactgttcaggtggagaat
gagtacggcagctactttgcctgtgactacaactacctgcgtcacctgaccagtctgttc
cgctcccacctggggaacgacgtggtgctgttcaccacagacggggccggggccgggtac
ctcaagtgtggaactctgcagggcgtctacgccactgtggactttggcccaggtgggaat
gtgtctgctgcatttgatgcacagagacaggcagagccccatggacccttggtgaactct
gagttctacaccggctggctggaccactggggagagcgtcactctacagtgtccaccgcc
atcgtggccaagtccctcaacgagatcctcgccatcggcgccagcgttaatctatacatg
tttattggaggaaccaattttggatactggaatggtgccaataccccctatgccccccag
cctactagttatgactatgatgccccgctcactgaggcaggagacctcactgacaaatat
tttgccatccaggatgtcatcaaactgtatcggaagataccagagggacccgtgcttcca
tcaacacctaaatatgcctacggagctgtgccaatgaagaagctccacacagtagtcgat
gctctagatatactatccttctccggtcctgtcaaaagcatctacccgttgaccttcatt
gagatgaaccaaccgtttgggttcgtcctctatcagaccaagctgcctgtggactgcagt
aagcccacccctctgtcctcaccactgaatggagtccatgaccgggcatatgtatcagtc
gatggggttgctgctgggatcctagagagggacaaggccctgaccatcaacgtgactggg
aaggctgggagtcaggtggacatactggtggagaatatgggcagagtcaactatgggaaa
gacatcaatgactttaagggcctggtgtctaacctaacattgggggccgacatcctcacc
ggctgggaagtctacagcctcagcatcgaccaggctgttagccagggtcttctctgggag
atgggctccagggtagctggcaccccaccaccttctcccctctccgtcccctccttctat
gggggcacctttgtcatcccggatggcatcccagacctgccccaggacacctacatccag
ttccctgattggagaaagggccaggtgtggatcaacggtttcaacctgggccgctactgg
cccgctcgcggcccacaaatcaccttgtacgtgcctgctagcatcctgagcacggccgtg
cccaacaacgtgaccgtcctggagctggagggggacccatgcacccctgggccctgtacc
gtggagttcacaaacaccccggtcctgaatgccacggttaagtctgaccacaaacaccag
agggcgctgttccataaagaggatctcttatga
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integrated database retrieval system