Oncorhynchus mykiss (rainbow trout): 110537572
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Entry
110537572 CDS
T07259
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00780
Biotin metabolism
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
110537572 (hlcs)
Enzymes [BR:
omy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
110537572 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
110537572 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
110537572 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
110537572 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
110537572
NCBI-ProteinID:
XP_036793426
Ensembl:
ENSOMYG00000031960
LinkDB
All DBs
Position
12:38773711..38848299
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AA seq
987 aa
AA seq
DB search
MTICSGKSHSVNNREATVGSKLSREAIPYGLKNGFPNVKKMLITLCYVYLWVRFQKCYTV
VIRSTLHKLCGGSKTNASNVSFTFCALNPLGKPRLQKGQPTCLQSVNKQLSPPLPEEDVF
LKLGDKAIYITEPQACEDLSKWTLLWGSSLSCGPRIENISFIIEATSGQRVGSQAHHTTE
NKKVLKWSDYCLPLACSPLHPFRAVAQASVDNFSRLGVAFMEDRLQLDNGLVPSKIVSVL
LRESAFKELLEKGKSEKHITSLSLKKQTEIILSEPSPCECEVLSVRGDLQLTQNRKCSLL
QPPEIQRALVERRGSEPLRGASPGVDSGDNSLGINHQHMEGHGRHLHLSSCHECLELENS
TILSVKYASVDNIPDLPDDYATCTDSGDETLDEFEEDEAESFVGQSRRVNVTGKPPNVLV
FTGGCQERFQRVRSLLGECIDMDSYTVYPLRPQQALSEPWLESATLLVLASDEPLTPQLQ
ARFLAYLEQGGRVLGLSSTLCPTGLALVPRKSRRSQICRLSFTKADTTELDLSVLASGSV
FVRELQSGGVPGETEVWGELKWDGDGGDKDMVIVRVTRGEDRGEAVLCQVHLETAPNSED
IVSSQGFDELKMSNARRYEVLTEILTSLGLSCEQSQAPPASPVYLLATSEERRASFLKWL
HTQLDKEGLLKCSKAFLKVVPSTELQAGPPLLPKGTLALVTDAPEAQSWEQFSLQTYSQH
LETRTLGRTLLYTQVTPTTMDLLEGLMLQLPEKMGLTAVAARQTQGRGRGGNAWLSPLGC
AMFSVHVQVAVSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYGNLMK
LGGVLVTSTVMGPTFHLLIGCGFNVSNSNPTIAINDLVMQHNREHGTSLEALSSAQLIGR
TLTCLEQLISDFQERGSEAVLPLYYKRWMHNGTQVRLWSEDGPQAVVVGLDDNGFLQVRS
EEQGVVSVQPDGNSFDMLRNLVVTKQR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttgtagtgggaagagccattctgtcaacaacagggaagccacggtcgggtcg
aaactgagcagagaggccataccatatgggctcaaaaacggctttccaaatgtaaagaaa
atgctaataacgttgtgctacgtctacctttgggtgcgctttcaaaagtgctacacagtg
gtaattcggagcaccctgcacaaattgtgcggggggagcaaaaccaatgcaagtaacgtt
agcttcacattctgtgccttgaatccactggggaagcctcggcttcagaaaggacaacca
acctgcctgcaaagtgtcaataagcagctcagtccacctctgcctgaggaggacgttttt
ctcaagttgggcgacaaggctatttacataaccgaacctcaggcatgtgaggacctcagc
aagtggactcttttgtgggggtcctctctgagttgtggcccacggatagagaacatttct
ttcatcatagaggctacatcaggacaaagagtgggcagccaggctcatcacactacagaa
aataaaaaagtgctgaagtggtcagactactgtctccctctggcctgtagcccattgcat
ccgttcagggccgtggctcaggccagcgttgacaacttcagccgccttggggtggcgttt
atggaagatcgccttcagctggacaatggactagtgccttcaaagatagtctctgtcctg
ctccgagaatctgcgttcaaagaacttctggagaaaggaaagtcggaaaagcacatcact
tccctctccctcaaaaaacagactgagatcatactctctgagccttctccctgcgagtgt
gaggtactctcagtgagaggcgacctccagctaacacaaaataggaagtgcagcctgctc
caaccgccagagatccagagggctttagtggaaagacgaggctccgagcccctacgagga
gccagccctggggtggacagcggggacaactcacttggcatcaaccaccagcacatggag
ggccacggccgccacctccacctctccagctgccacgagtgcctggagctggagaacagc
accatcctctccgtcaagtacgcctcggtcgacaacatccctgaccttcccgacgactac
gccacgtgcacggacagcggggacgagactctggacgagtttgaggaggatgaggcagag
agctttgttggtcaaagccggcgggtcaatgttaccgggaagccccccaacgtgctggtg
ttcacgggtggctgccaggagaggttccagagggtgcgttcgctgctgggcgagtgcatc
gacatggacagctacacggtgtaccccctgaggccccagcaagccctcagtgaaccctgg
ctggagagtgccaccctgctagtgctggcctcagacgaaccccttaccccccagctccag
gcccgtttccttgcatacctggagcagggtggcagggtcctggggctctcctccaccctc
tgccccacggggctggccctggtgcccaggaagagcaggaggagccagatctgcaggcta
agcttcaccaaggctgataccacagagctggatctgagcgtgcttgccagcgggagtgtg
tttgtcagggagctgcagagtggtggggtccctggagagacggaagtctggggggagctg
aagtgggacggagatggtggagacaaggacatggtcatcgtcagggtgacgcgtggagag
gaccgaggggaggctgtgctgtgtcaggtgcacctggagacggcccccaactctgaagat
attgtgtcgtctcagggttttgatgagttgaagatgagcaatgcgcggcgctatgaggtc
ctgacagagatcctcacctccctgggcctgagctgtgagcagagtcaggccccgcccgcc
agccctgtctacctcctcgccacctctgaggagcgcagggccagcttcctcaagtggctg
cacacccagttggacaaggaagggctgctcaagtgttccaaggcattccttaaagtggtc
cccagcacagagcttcaggctgggccccccctgctgcccaaggggactctggccctggtc
acagatgccccagaggcccagagctgggagcagttcagcctgcagacctacagccagcac
ctggagacccgcacgctgggacgcacccttctctacactcaggtcacccctaccaccatg
gacctactagaggggttgatgctccagctgcctgagaaaatggggttaactgctgtagca
gctcgacagacccagggtagaggccgtggggggaatgcgtggctgagtcctctagggtgt
gccatgtttagtgtgcatgtgcaagtggctgtgagttccagactgggccagaggatcccc
ttcctgcagcacctggctgccctggctgtggtggaggccgtacgcacccttcccggttac
caggacatcgacctaagggtgaagtggcctaatgacatttactacggtaacctgatgaag
ctaggaggagtgttggtgacatcaacagtcatgggaccaaccttccatctcctcattggc
tgtggctttaacgtcagcaacagcaaccccaccattgccatcaacgacctggtgatgcag
cacaaccgagagcatggcacaagcctggaggcacttagctcagcccagctcatcggccgc
accctcacctgcctggagcagctcatctctgacttccaagaacgggggtcagaggccgtc
ctacccctctactacaagagatggatgcacaatgggacccaggtgcgtctgtggagtgag
gatggcccccaggctgtcgtggtgggcctcgatgacaacggcttcctgcaggtgcgctcc
gaggagcagggcgtggtgtccgtgcagcctgacggcaactcctttgacatgctaaggaac
ctggtggtcaccaagcaacgctag
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