KEGG   Oncorhynchus mykiss (rainbow trout): 110538352
Entry
110538352         CDS       T07259                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03020  RNA polymerase
omy03420  Nucleotide excision repair
omy04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110538352
  09124 Replication and repair
   03420 Nucleotide excision repair
    110538352
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110538352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110538352
   03400 DNA repair and recombination proteins [BR:omy03400]
    110538352
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110538352
  RNA polymerase III system
   RNA polymerase III
     110538352
  RNA polymerase I system
   RNA polymerase I
     110538352
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110538352
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 110538352
NCBI-ProteinID: XP_021480782
Ensembl: ENSOMYG00000045325
LinkDB
Position
12:75887606..75890269
AA seq 127 aa
MSDNEGDFDDGDFDDAEEDEGLDDLENVEDEDQENVKILPAGEGSQANQKRITTQYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaaggagattttgatgatggagactttgatgacgctgaagaggatgag
ggtttggatgacctggaaaacgttgaagatgaggaccaagagaatgtgaagatcctgcct
gcaggggaggggtcgcaggctaaccagaagaggatcacaacccaatacatgaccaaatat
gaaagggccagggtgctggggacacgtgccctccagatagcgatgtgtgccccagtcatg
gtggagctggagggagagacagaccctctgcaaattgccatgaaagagctaaagtgcagg
aagatccccatcatcatccggcggtaccttcctgatggcagttatgaagattggggctgc
gacgagctcatcatcacagactga

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