Oncorhynchus nerka (sockeye salmon): 115102736
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Entry
115102736 CDS
T07952
Name
(RefSeq) glutamate decarboxylase 1-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00250
Alanine, aspartate and glutamate metabolism
one00410
beta-Alanine metabolism
one00430
Taurine and hypotaurine metabolism
one00650
Butanoate metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
115102736
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
115102736
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
115102736
00430 Taurine and hypotaurine metabolism
115102736
Enzymes [BR:
one01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
115102736
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
DTX3L_a-b
Motif
Other DBs
NCBI-GeneID:
115102736
NCBI-ProteinID:
XP_029478838
EnsemblRapid:
ENSONEG00000042281
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Position
LG20:34715066..34743407
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AA seq
588 aa
AA seq
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MATSEPTAAGGDQDPNSANLRPSSTNYDAWMQGCTRKLGMKICGFLQKNNSLGEEGRLAG
SLSERQKNLFSCVNSDRDARFCRTETDFSNMFARDLLPAKNGEEATMQFLLELVDILTNY
VRKSFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRF
FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPSGEGDGI
FSPGGAISNMYSVMIARYKYFPEVKTKGMSVAPRLVLFTSEHSHYSIKKAGAALGFGSEN
VVLLSTDERGRVIPADLEAKILDVKQKGYHPLFVNATAGSTVYGAFDPINEIADICEKYN
MWLHVDGAWGGGLLMSRKHRHKFSGVERANSVTWNPHKMMGVPLQCSAILVREKGILAGC
NSMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLS
QYLYDKIRNREGYEMVFDGVPQHTNVCFWYIPPSLRGMEHNSKEYREKLHKVAPNIKAMM
MESGTTMVGYQPQGQKVNFFRMVISNPAALQSDIDFLIDEIERLGRDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctgaaccgacagccgctggcggggaccaggaccccaactccgccaattta
cgaccttcatccacaaactatgacgcgtggatgcaaggatgcacgcggaaactggggatg
aagatctgtgggttcctgcagaagaataacagtctaggggaggaaggccggctcgcaggc
tcgctctcagaacgccagaagaacctgttctcctgtgtcaacagcgaccgggatgcgcgc
ttctgccgcactgagaccgatttctccaacatgtttgcgagagatttacttcccgccaaa
aatggagaagaggccactatgcagttcttattggaacttgtggacatcctcaccaactac
gtcaggaagtcgtttgaccgttccaccaaggttctggacttccaccatccgcatcagctg
ctcgagggcatggagggcttcaacctcgagctctctgaccagccagagtcccttgagcag
atccttgttgactgcagggacacgctcaagtacggcgtgcgaacaggtcatccgcggttc
ttcaaccaactctctactgggctggacatcattgggctggctggggagtggctcacctct
acagccaacacaaacatgttcacctatgagatcgctccagtgtttgtcctgatggagcag
ctgacgctgaagaagatgagagagattattggctggccctcaggagagggggacggaata
ttctcaccagggggtgccatctctaacatgtacagtgtgatgatcgctcgctacaagtac
ttccctgaggtcaagaccaagggcatgtctgtcgctccccgtctggtgcttttcacatca
gaacatagccactactctatcaagaaggcaggggcagctctgggctttggttcagagaac
gtggtcctgctgagcacagatgagagggggagagttattcctgctgatctagaagctaag
atcctcgatgtcaagcagaagggttatcatccactgtttgtgaacgctacagctggttcc
actgtttacggagcatttgaccccatcaatgagatcgctgacatctgcgagaaatacaac
atgtggttgcacgtagacggtgcatggggaggtggtctcctgatgtccaggaagcatcgc
cataagttcagcggtgttgagagggctaactctgtcacgtggaatcctcacaagatgatg
ggagtgcctctacagtgctctgccatcctggtcagagagaagggtattctggcgggctgt
aactcgatgtgcgcagggtacctgttccagcctgataaacagtatgatgtcagctatgac
acgggtgacaaagccatccagtgtgggcgccacgttgacatctttaagttctggctcatg
tggaaggccaagggcaccataggatttgagcagcacattgacaagtgtctggacctgtct
cagtacctctacgacaagatcagaaacagagagggatacgagatggtgttcgatggagtg
ccccagcacaccaatgtatgtttctggtacattccacccagcctgagaggcatggaacac
aacagcaaagagtatcgagagaaacttcacaaggtggcgcccaatatcaaagcaatgatg
atggagtctggtacgaccatggtgggctaccagcctcagggccagaaggtcaacttcttc
cgcatggtcatctccaaccctgcagccctccagtcagacatcgacttccttattgacgag
atcgagaggctggggcgtgacctgtag
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