Oncorhynchus nerka (sockeye salmon): 115103228
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Entry
115103228 CDS
T07952
Name
(RefSeq) tropomyosin alpha-3 chain-like isoform X1
KO
K09290
tropomyosin 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
one04814
Motor proteins
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115103228
04820 Cytoskeleton in muscle cells
115103228
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115103228
04261 Adrenergic signaling in cardiomyocytes
115103228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115103228
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
115103228
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
Crescentin
DUF745
DUF3450
XhlA
DUF16
TMF_DNA_bd
SlyX
Fib_alpha
Lebercilin
Exonuc_VII_L
ATG16
CLZ
EzrA
FPP
DUF1664
Laminin_I
Motif
Other DBs
NCBI-GeneID:
115103228
NCBI-ProteinID:
XP_029479893
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Position
LG3:7857001..7883009
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AA seq
369 aa
AA seq
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MEAIKKKMLMLKMDKETALEASDQSEIDKKAAEDKSKQHDDALIQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEMQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELAEGKCAELEEELKNVSNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSICASQRQGGECQHPRHP
GQDPGGPQQLLSGYWPLHHHLLLLHPLTSGPVSLSVLADCLAWGGMFIVFGEGSTFFSPH
LAKCFSPVD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgctgatgctgaagatggataaggagactgctctggaa
gcgtctgaccagtccgagattgacaaaaaggcagctgaggataagagcaagcagcatgac
gatgcgttgatccagatgcagaagaagctgaaggggactgaggatgagctggacaaatat
tctgaggccttgaaggatgcccaggagaagctggaggttgcagacaagaaagctgcagat
gctgaggctgaggtggcctctctgaacaggcgtatccagctggttgaggaggagttggac
agggcccaggagagactggccaccgctctgcagaaactggaggaagcagagaaagctgca
gatgagagcgagaggggtatgaaggtaattgagaacagggcctccaaggatgaggagaag
atggagatgcaggagatccagctgaaggaggccaagcacattgctgaggaggctgaccgc
aagtatgaggaggtggctcgtaagctggtgatcattgagggtgatctggagcgtacagag
gagagggcggagctggccgagggcaaatgcgccgagttggaggaggagctgaaaaatgtc
agcaataacttaaagtccctggaagcccaagctgagaagtactcccagaaagaggacaag
tatgaggaggagatcaagatcctgaccgacaaactcaaagaggctgaaacccgtgctgag
tttgctgagagatcagtggccaaactggaaaagaccattgatgacctggaagatgagctc
tatgcacagaaattgaagtacaaagccattagtgaggagttggaccatgccctcaatgac
atgacctccatatgcgctagccaacgccaaggaggagaatgtcaacatccacgccaccct
ggacaagaccctggaggacctcaacagcttctgagtggctactggcccctccaccaccac
ctcttactgctccaccccctcacctctggccctgtctctctgtctgtgctggctgactgt
ttagcgtggggggggatgttcattgtttttggtgaaggtagcactttcttcagtccacac
ctagccaaatgtttctccccagtagactaa
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