Oncorhynchus nerka (sockeye salmon): 115105454
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Entry
115105454 CDS
T07952
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00780
Biotin metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
115105454 (hlcs)
Enzymes [BR:
one01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
115105454 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
115105454 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
115105454 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
115105454 (hlcs)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
115105454
NCBI-ProteinID:
XP_029483390
EnsemblRapid:
ENSONEG00000035425
LinkDB
All DBs
Position
LG22:complement(47906792..47950619)
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AA seq
948 aa
AA seq
DB search
MLITLCYVYLWVRFQKCYTVVIRSTLHKLCGGSKTNASKVSFTFCALNPLGKPRLQKGQP
TCLQSVNKQLSPPLPEEDVFLKLGDKAIYITEPQACEDLSKWTLLWGSSLSCGPRIENIS
FIIEATSGQRVGSQAHHTTENKKVLKWSDYCLPLACSPLHPFRAVAQASVDNFSRLGVAF
MEDRLQLDNGLVPSKIVSVLLRESAFKELLEKGKLEKHITSLSLKKQTEIILSEPSPCEC
ELLSVRGDLQLTQNRKCSLLQPPEIQRALVERRGSEHLRGASPGVDSGDNSLGINHQHME
GHGRHLHLSSCHECLELENSTILSVKYASVDNIPDLPDDYATCTDSGDETLDEFEEDEAE
SFVGQSRRVNVTGKPPNVLVFTGGCQEKFQRVRSLLGECIDMDSYTVYPLRPQQALSEPW
LESATLLVLASDEPLTPQLQARFLAYLEQGGRVLGLSSTLCPTGLALVPRKSRRSQICRL
SFTKADTTELDLSVLASGSVFVRELQSGGVPGETEVWGELKWDGDGGDKDMVIVRVTRGE
DRGEAVLCQVHLETAPNSEDIVSSQGFDELKMSNARRYEVLTEIITSLGLSCEQSQAPPA
SPVYLLATSEERRASFLKWLHTQLDKEGLLKCSKAFLKVVPSSELQAGPPLLPKGTLALV
TDAPEAQSWEQFSLQTYSQHLETRTLGRTLLYTQVTPTTMDLLDGLMLQLPEKMGGLTAV
AARQTQGRGRGGNAWLSPLGCAMFSVHVQVAVSSRLGQRIPFLQHLAALAVVEAVRTLPG
YQDIDLRVKWPNDIYYGNLMKLGGVLVTSTVMGPTFHLLIGCGFNVSNSNPTIAINDLVM
QHNREHGTSLEALSSAQLIGRTLTCLEQLISDFQERGSEAVLPLYYKRWMHNGTQVRLWS
EDGPQAVVVGLDDNGFLQVRSEEQGVVSVQPDGNSFDMLRNLVVTKQR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgctaataacgttgtgctacgtctacctttgggtgcgctttcaaaagtgctacacagtg
gtaattcggagcaccctgcacaaattgtgcggggggagcaaaaccaatgcaagtaaggtt
agcttcacattctgtgccttgaatccactggggaagcctcgacttcagaaaggacaacca
acctgcctgcaaagtgtcaataagcagctcagtccacctctgccggaggaggacgttttt
ctcaagttgggcgacaaggctatttacataaccgaacctcaggcatgtgaggacctcagc
aagtggactcttttgtgggggtcctctctgagttgtggcccacggatagagaacatttct
ttcatcatagaggctacatcaggacaaagagtgggcagccaggctcatcacactacagaa
aataaaaaagtgctgaagtggtcagactactgtctccctctggcctgtagcccattgcat
ccgttcagggccgtggctcaggccagcgttgacaacttcagccgccttggggtggcgttt
atggaagatcgccttcaactggacaatggactagtgccttcaaagatagtctctgtcctg
ctccgagaatctgcgttcaaagaacttctggagaaaggaaagttggaaaagcacatcact
tccctctccctcaaaaaacagactgagatcatactctctgagccttctccctgcgagtgt
gagctactctcagtgagaggcgacctccagctaacacaaaataggaagtgcagccttctc
caaccgccagagatccagagagctttagtggaaagacgaggctccgagcacctacgagga
gccagccctggggtggacagcggggacaactcacttggcatcaaccaccagcacatggag
ggccacggccgccacctccacctctccagctgccacgagtgcctggagctggagaacagc
accatcctctccgtcaagtacgcctcggtcgacaacatccctgaccttcccgacgactac
gccacgtgcacggacagcggggacgagactctggacgagtttgaggaggatgaggcagag
agctttgttggtcaaagccgacgggtcaatgttaccgggaagccccccaacgtgctggtg
ttcacgggtggctgccaggagaagttccagagggtgcgttcgctgctgggcgagtgcatc
gacatggacagctacacggtgtaccctctgaggccccagcaagccctcagtgaaccctgg
ctggagagtgccaccctgctagtgctggcctcagacgaaccccttaccccccagctccag
gcccgtttccttgcatacctggagcagggtggcagggtcctggggctctcctccaccctc
tgccccacggggctggccctggtgcccaggaagagcaggaggagccagatctgcaggcta
agcttcaccaaggctgataccacagagctggatctaagtgtgcttgccagcgggagtgtg
tttgtcagggagctgcagagtggtggggtccctggagagacggaagtctggggggagctg
aagtgggacggagatggtggagacaaggacatggtcatcgtcagggtgacgcgtggagag
gaccgaggggaggctgtgctgtgtcaggtgcacctggagacggcccccaactctgaagat
attgtgtcgtctcagggttttgacgagctgaagatgagcaatgcgcggcgctacgaggtc
ctgacggagatcatcacctccctgggcctgagctgtgagcagagtcaggccccgcccgcc
agccctgtctacctcctcgccacctctgaggagcgcagggccagcttcctcaagtggctg
cacacccagttggacaaggaagggctgctcaagtgttccaaggcattccttaaagtggtc
cccagctcagagcttcaggctgggccccccctgctgcccaaggggaccctggccctggtc
acagatgccccagaggcccagagctgggaacagttcagcctgcagacctacagccagcac
ctggagacccgcacgctgggacgcacccttctctacactcaggtcacccctaccaccatg
gacctactagacgggttgatgctccagctgcctgagaaaatggggggtttaactgctgta
gcggctcgacagacccagggtagaggccgtggggggaatgcgtggctgagtcctctgggg
tgtgccatgtttagtgtgcatgtgcaagtggctgtgagttccagactgggccagaggatc
cccttcctgcagcacctggctgccctggctgtggtggaggccgtacgcacccttcccggt
taccaggacatcgacctaagggtgaagtggcctaatgacatttactacggtaacctgatg
aagctaggaggagtgttggtgacatcaacggtcatgggaccaaccttccatctcctcatt
ggctgtggctttaacgtcagcaacagcaaccccaccattgccatcaacgacctggtgatg
cagcacaaccgagagcatggcacaagcctggaggcacttagctcagcccagctcatcggc
cgcaccctcacctgcctggagcagctcatctctgacttccaagaacgggggtcagaggcc
gtcctacccctctactacaagagatggatgcacaatgggacccaggtgcgtctgtggagt
gaggatggcccccaggctgtcgtggtgggcctcgatgacaacggcttcctgcaggtgcgc
tccgaggagcagggcgtggtctccgtgcagcctgacggcaactcctttgacatgctaagg
aacctggtggtcaccaagcaacgctag
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