Oncorhynchus nerka (sockeye salmon): 115107794 Help Entry 115107794         CDS       T07952                                  Name (RefSeq) CAD protein-like isoform X1   KO K11540   carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:6.3.5.5 2.1.3.2 3.5.2.3] Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one00240   Pyrimidine metabolism one00250   Alanine, aspartate and glutamate metabolism one01100   Metabolic pathways one01240   Biosynthesis of cofactors Module one_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP Brite KEGG Orthology (KO) [BR:one00001]  09100 Metabolism   09104 Nucleotide metabolism    00240 Pyrimidine metabolism     115107794   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     115107794  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:one01002]     115107794 Enzymes [BR:one01000]  2. Transferases   2.1  Transferring one-carbon groups    2.1.3  Carboxy- and carbamoyltransferases     2.1.3.2  aspartate carbamoyltransferase      115107794  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.2  In cyclic amides     3.5.2.3  dihydroorotase      115107794  6. Ligases   6.3  Forming carbon-nitrogen bonds    6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor     6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)      115107794 Peptidases and inhibitors [BR:one01002]  Cysteine peptidases   Family C26: gamma-glutamyl hydrolase family    115107794  Metallo peptidases   Family M38: beta-aspartyl dipeptidase family    115107794 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CPSase_L_D2 GATase CPSase_sm_chain OTCace_N OTCace CPSase_L_D3 MGS Dala_Dala_lig_C ATP-grasp ATPgrasp_Ter Amidohydro_1 ATP-grasp_3 Peptidase_C26 Motif Other DBs NCBI-GeneID:  115107794 NCBI-ProteinID:  XP_029487300 EnsemblRapid:  ENSONEG00000028445 LinkDB All DBs Position LG24:complement(13511756..13540644) Genome browser AA seq 2262 aa AA seqDB search MATLILEDGTTFKGRLFGANASVSGEVVFQTGMVGYPEALTDPSYRCQILTLTYPLQGNY GIPHDEEGDFGLSKWFESSKIHAAALIVGEVSQNPSHWSSAMSLDQWLKEQGIPGLEGVD TRSLTKKIREKGTMLGKLVVDGTSEANVPFDNPDQRNLVKEVSMKEPLVFNPSGTVRITA VDCGIKYNQIRCLCQRGACVTVVPWDHPLDSTDFDGLFISNGPGDPQFCKETINNVRKVV CVDNPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTDRCFITSQNHGFAVD PLTLPQGWDVLFTNANDQTSEGIVHNTKHLFSVQFHPEHMAGPTDLVSLFDVFLDTVRDH KEGRSGKPVKQRLTERLTYPGSPKPEEFVRPRKVLILGSGGLSIGQAGEFDYSGSQAIKA LKEENIQTVLINPNIATVQTSKGLADKVYFLPLTPEYVTEVIKNERPDGVLLTFGGQTAL NCGVELTKRGVLEKYAVRVLGTPVASIEMTEDRKIFVEKMEEISEHVAPSEAALSVEQAV AAAERLGYPVLVRSAFALGGLGSGFANNSEELTSLVTSAFAHTSQVLVDKSLKGWKEIEY EVVRDSYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDYEYNMLRDTAIKVIRHLGIV GECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPVLKNSV TNQTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQKALR MVDENCVGFDHTIKPVSDEELQTPTDKRIFVLAAALRAGYTVNRLYDLTKIDRWFLHKMK NIADHEKVLESYNQDESAMPLEVMRKAKQLGFSDKQIALAVQSTELAMRKLRRDWCILPV VKQIDTVAAEWPAQTNYLYLTYNGTESDLGFSEPHVMVIGSGVYRIGSSVEFDWCAVGCI MELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGVILSMGGQL PNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPLWKELTAIESAMKFCE TVGYPCLVRPSYVLSGAAMNVAYTDSDLEKYLNSAVAVSKEYPVVISKFIQEAKEIDVDA VACDGVVMAIAVSEHVENAGVHSGDATLVTPAQDINQKTMERIKMIVHAIGQELQVTGPF NLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVSLATRVIMGEEVEPVGLMKGVGIV GVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNILLSI GSYKNKSELLPTVQALESLGYDLYASLGTADFYTEHGVKVMAVDWPFEEEESDCPNKDKQ RNILEYLEDHHFDMVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLIIDIKCTKLFF QALRLVGGFPPVKTHVDCMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALAGGI TMVCAMPNTAPAIIDLSSLTMVQKLAKAGCRCDYALYVGAASDNAAVLPSIASSVAGLKM YLNDTYSTLKMDNVSVWMEHFEKWPKHLPIVAHAEKQTVAAILMVAQLYQRAVHICHVAK KEEILIIRVAKQKGIQVTCEVAPHHLFLCEENVADIGDGRAQVRPMLGTREDMEALWEHM DIIDCFATDHAPHSVEEKNSEKPPPGYPGLETMLPLLLTAVSDGRLTVDDIIKRLYDNPR KIFSLPAQDNTYVEVDLEQEWVIPKHMQFTKSKWTPFEGMKVKGKVRRVVLRGEVAYIDG QVLVPPGYGEDVKTWPAPIPTQTPEPVKEVQPTPEHPRLTSPCEGIRTRAPSPRRSAGDG RYMLPPRIHRSSDPGVTPGFRTIHTKWRLDFVAEDSRERALRRAFEEDLREEMAPAAGDG SSHPPPLARVLSPRAEAGLGVAVGQTLTHLQTSPLLHPLVGQHVLSVRQFSKEQISHLFN VAHTLRLMIQKERTLDILKGKVMASMFYEVSTRTSSSFAAAMQRLGGSVVHFCEATSSSQ KGESLADSVQTMSCYADVLVLRHPTPGAVESAARHCRKPVINAGDGVGEHPTQALLDVFT IREELGTVNGMTITMVGDLKHGRTVHSLARLLTQYRITLRYVAPKNLHMPSEIIDFVASK GIKQEEFESIEEALPDTDVLYITRIQKERFSSEEEYKACFGQFILTPHIMTGAKRKMVVM HPLPRVNEISAEVDTDPRAAYFRQAENGMYIRMALLATVMGR NT seq 6789 nt NT seq  +upstreamnt  +downstreamnt atggcaaccctgattttagaagatgggaccaccttcaagggacgccttttcggggcaaat gcgtcggtgtctggtgaagttgtgttccagacaggcatggtgggctacccagaggccctg actgacccgtcctacaggtgtcagattctcaccctcacctaccctctgcagggcaactat ggcataccccatgatgaggagggtgactttggactcagcaagtggtttgagtcttctaag atccacgctgcagccctcatcgtcggagaggtctcccagaaccccagccactggagctca gccatgtctctggaccagtggctcaaagagcagggcatccccggcctagagggagttgac acccgcagtctgaccaagaagatccgtgagaagggaaccatgctggggaagcttgttgtg gacggaacgtcggaggccaacgttccatttgacaaccctgaccagaggaacctggtcaag gaggtgtccatgaaggagcccctggtgttcaaccccagtggtactgtcaggatcacagca gtagactgtggcattaagtacaaccagatccgctgcctgtgtcagagaggggcctgtgtc actgtggtgccctgggatcacccactggacagcacagattttgatgggctattcataagc aacggccctggggacccccagttctgtaaggagaccataaacaacgtgaggaaggtggtg tgtgtggataaccccaagcctgtgtttggaatctgcctgggccaccagcttctctccctt gtcatcggagcaaaaacctacaaaatgaagtatggaaatcgtggccataaccagccctgc atccacaagggcacggatcgctgtttcatcacatctcagaaccatggctttgctgtggac cctctcaccctgcctcagggctgggatgtgctcttcaccaacgccaatgaccagaccagt gagggcattgtgcacaacaccaaacacctattcagtgtccagttccacccagagcacatg gcaggtcccactgacctggtcagtctgtttgacgtgtttctggacacggttagagaccac aaggagggcaggagtggcaaaccagtgaagcagagactgacggagcgcctgacctaccct gggtctcccaagccggaagagtttgttcggccacgcaaggtcctgatcctgggctctggg ggcctctccatcggacaggctggggagtttgattactctggctctcaggccataaaagca ttgaaggaggagaacattcagactgtgctcatcaaccccaacatcgccacggttcagacc tccaagggactggctgacaaggtttacttcctacctctcaccccggagtacgtcactgag gtgataaagaatgagcgtccagacggggtcctcctgaccttcggggggcagactgctctg aactgtggggtggagctgaccaaaagaggtgtcctggagaagtatgcggtgcgtgtgctg gggacaccagtggcctccatcgaaatgactgaggacaggaagatctttgtggagaagatg gaggagatcagtgaacatgtggcgcccagcgaggctgctctgtctgtggagcaggcggtg gcggctgcagagcgtctaggctaccctgtcctggtgcgctctgcctttgccctgggcgga ctgggctctggcttcgccaataacagtgaggagttgacctctctagtgacctctgccttc gcccacacctcccaggtcctagtggacaagtccctgaagggctggaaggagatcgagtat gaagtggtcagagactcctacgacaactgtattaccgtatgtaacatggagaacattgac cctctgggtatccacactggggagtcgatcgtggtggcgcccagtcagacgctcaacgac tacgagtacaacatgttgagggacaccgccatcaaggtcatccgacacctgggcatcgtg ggagagtgtaacatccagtacgccctcaacccagagtctgaacagtactacatcattgag gtgaatgcccgtctgtctcggagctcagctctggccagtaaagctacaggatatcctctg gcctatgtggctgccaagctgggacttggcatccctctacctgtcctcaagaactctgtg accaaccagaccacggctaactttgagcccagtctggactactgtgtggtgaaggtccct cgctgggatctcagcaagttcctccgtgtcagcaccaagataggcagctccatgaagagc gtgggagaggtgatggcaatcggccgcagctttgaggaagccttccagaaggctctacgg atggtggatgagaactgtgtgggctttgaccacaccatcaaaccagtgtctgacgaggag ctgcagaccccgacggacaagcgtatctttgtgctggcggctgctctgagggcgggctac acagtgaaccgcctgtacgacctgaccaagatcgaccgctggtttctccacaagatgaag aacatcgcggaccatgagaaggtgctggagtcgtacaaccaggacgagagcgccatgcct ctggaggtgatgaggaaagccaagcaactgggcttctcagacaaacagatcgccctggct gtgcagagcacggagctggcgatgaggaagctgcgacgtgattggtgcatcttgccggtg gtgaagcagatcgacactgtggcagcagagtggccagcccagaccaactacctgtacctg acctataacggaacagagagcgacctgggcttcagcgagccccatgtaatggtgatcggc tccggcgtttaccgcattggcagcagtgtggagtttgactggtgtgctgtgggctgcatc atggaactcaggaagatgggctataaaaccatcatggtgaactataacccagagactgtc agcacagactacgacatgtgtgaccgtctctacttcgatgagatctcctttgaggttgtt atggacatctatgagatggagaacccagagggagtaatcctgtccatggggggccagctg cccaacaacatcgccatgtccctccacaggcagcagtgtcgcatcctgggcacctccccg gagttcatcgactctgctgagaacaggttcaagttctcccgcatgctggacaccatcggc atcagccagcccctgtggaaggaactcacagcgattgagtcggccatgaagttctgtgag accgtgggctacccgtgtctggtgcgtccctcctacgttctgagcggagcagccatgaac gtggcgtacacagacagcgacctggagaagtacctgaacagcgctgtggccgtgtccaag gaataccctgtggtcatctccaagttcatccaggaggccaaggagatagacgtggatgcg gtggcatgtgacggtgtggtgatggccatcgccgtgtcagagcatgtggaaaacgctggg gtgcactctggggacgccaccctggtcacgcccgcccaggatatcaaccagaagaccatg gagcgcatcaagatgatcgtccacgccatcggtcaggagctgcaggtcaccgggcccttc aacctgcaactcatcgctaaggatgaccagctgaaggtgatcgagtgcaacgtccgagtc tcccgctccttcccgttcgtctcgaagacactgggagtggatctggtctccctggcaaca cgtgtcatcatgggagaagaggtggagcctgtgggcctgatgaaaggagtgggcattgtg ggcgtcaaggtcccccagttctcgttctctcgtctggctggggctgatgtggttctgggg gtagagatgaccagcactggggaggtggcctgctttggagagaacagatacgaggcctac ctgaaggccatgctcagcacaggcttcaagatccccaagaagaacattttgctctccatc ggcagttataagaacaagagtgagctactgcctactgtacaggctctggagagtctaggc tatgacctgtatgccagtctggggaccgctgacttctacactgagcatggagtcaaggtg atggcagtggactggccgtttgaggaagaggagagtgactgccccaacaaggacaagcag aggaacatcttggaatacctggaggaccaccactttgacatggtcatcaacctctccatg aggaactctggaggccgacgcctctcctcctttgtaaccaagggttaccgcacccgccgc atggccatcgactactctgtccccctcatcattgacatcaagtgcactaagctatttttc caggcgctgcgtctggttggaggctttccgcccgtcaagactcacgtggactgtatgacg tcacagaagttgattcgcctgcctggtctgatagatgtgcacgtccacctgcgggagccg ggtgccactcacaaggaagacttctcctcgggcacagcggctgccctagcagggggcatc accatggtgtgtgccatgcccaacacggcacccgccatcatcgacctcagctctctcacc atggtccagaagcttgccaaggcagggtgtcgctgtgactatgccctctatgtcggggcg gcgtcagacaatgctgctgtcttaccatccattgccagctccgtcgctgggctgaagatg tatctgaacgacacctactccactctgaagatggacaatgtctcagtttggatggaacac tttgagaaatggcccaagcacctaccaatcgtggctcacgcagagaagcagacggtggca gccatcttgatggtggcccagctctaccagagagctgttcatatctgccatgtggccaag aaggaggagattctgatcatccgcgtggccaagcagaaaggcatccaggtgacgtgtgag gtggcgccccatcacctcttcctgtgtgaggagaacgtggcggacatcggggacggccgg gcgcaggtacgccccatgctgggaacccgggaggacatggaggccctctgggaacacatg gacatcattgactgcttcgcaaccgaccacgccccccattcagtggaggaaaagaactct gagaagccccccccaggctaccctggcctggagaccatgctgcctctcctcctcaccgcc gtcagcgacggtcgcctcaccgtcgacgatatcatcaagcgcttgtacgacaacccccgc aagatcttctccctgcccgcacaggacaacacttatgtagaggtggacctggagcaggag tgggtcatccccaaacacatgcagttcaccaagtccaagtggacgcctttcgaaggcatg aaggtgaagggcaaggtccgcagagtggtgctcagaggagaggtggcctacatcgacggg caggtgctggtccctcctggttatggagaggatgtgaagacctggcctgcacccatcccc acccagacccctgagccggtgaaagaagtccaaccgaccccagagcacccgcggctgacc tcgccgtgtgagggcatccgtacccgtgccccgagccctcgccgctccgctggggatggc cgctacatgctcccaccccgtatccacaggtcgtctgacccgggcgttacaccaggtttt aggacaatacacacaaaatggcgcttggatttcgttgctgaagattcaagggaaagagca ttaagaagagcatttgaagaagatttaagagaagagatggcccccgcagctggggatggc tctagccatccccctcccctggccagggtcctgtccccccgggctgaggcagggttgggg gtagcggtagggcagaccctgacacacctccagacctcccccctactgcaccccctagtg ggacaacacgtcctctctgtcaggcagttcagcaaggaacagatttctcacttgtttaat gtggcccatactcttcgcctgatgattcagaaagagagaaccctggacatcctgaagggt aaggtgatggcgtccatgttctacgaggtcagcacgcgcaccagcagctcatttgcggcg gccatgcagcgtctgggcggctctgtggtccatttctgcgaggccacctcctcgtcgcag aagggtgaatctctggccgactcggtccagaccatgagctgctatgctgacgtcctggtg ctccgacacccgacgccaggggctgtagagtctgcagcgaggcattgccggaagccagtg atcaacgctggggacggggtcggggagcaccccactcaggccctgctggatgtgtttacc atcagagaggagctgggcacggtcaacggcatgacgatcaccatggtaggagacctgaag cacggacgcactgtgcattccttggccaggctgctcacccagtacaggatcactctgcgc tacgtcgccccaaagaacctgcacatgccctccgagatcatcgactttgtggcctccaaa ggcatcaagcaggaagagtttgagagcatcgaggaggcactgcctgacactgacgtgctc tacattaccaggatccagaaggagaggttttcctcagaggaagagtacaaagcgtgcttc ggtcagttcatccttaccccacacatcatgactggagccaagaggaagatggtggtgatg catcctctaccgagagtcaatgagatcagtgcggaagtggacacagatcctcgtgctgcc tacttccggcaggctgagaacggcatgtacatccgcatggccctcctggccacagtgatg ggtagatga

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