Oncorhynchus nerka (sockeye salmon): 115108955
Help
Entry
115108955 CDS
T07952
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00250
Alanine, aspartate and glutamate metabolism
one00410
beta-Alanine metabolism
one00430
Taurine and hypotaurine metabolism
one00650
Butanoate metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
115108955
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
115108955
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
115108955
00430 Taurine and hypotaurine metabolism
115108955
Enzymes [BR:
one01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
115108955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
115108955
NCBI-ProteinID:
XP_029489370
EnsemblRapid:
ENSONEG00000012891
LinkDB
All DBs
Position
LG3:35653445..35666874
Genome browser
AA seq
586 aa
AA seq
DB search
MAASAPSSSGNEPDPNSTNLRPPGSSYDAWCGVAHGCSRKLGMKICGFLQKNNNLEEKIS
SFKERSSKDLLDNSDRDSRFRRTETDFSNLFARDLLPAKNGEEPTMQFLLEVVDILTNYV
RKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRFF
NQLSTGLDIIGLSGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPDGEGDGIF
SPGGAISNMYSVMIARYKFFPEVKTKGMTAAPRLVLFTSEHSHYSIKKASAALGFGTENL
ILLSTDERGRVIPADLEAKVIDAKARGCVPMFVNATAGSTVYGAFDPIHEIADICEKYNM
WLHVDGAWGGGLLMSRKHRHKLCGVERANSVTWNPHKMMGVPLQCSAILVRERGVLSGCN
SMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLSH
YLYTKIKGREGYQMVFDGEPQHTNVCFWYLPPGIRDMPDGQEKREKLHKVAPKIKALMME
SGTTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLTDEIERLGQDL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcaccttcctcgtctggcaacgaaccggatcccaactcgacaaattta
cgaccaccaggctcaagctatgacgcttggtgtggagttgctcacggatgttctagaaaa
ttgggaatgaagatatgtggatttttgcagaagaacaacaacctcgaggagaagattagt
tccttcaaggaaagatcgtctaaggacctgctggataacagcgacagggattcccgtttc
agacgcaccgagacggacttttccaatctatttgctagagatttattaccagctaaaaat
ggagaggagccaactatgcagtttttgttggaggtggtggatatcctcacaaactacgtc
cggaagacattcgacagatccaccaaggtcctggacttccaccacccccaccagctgctg
gaaggcatggagggcttcaacctggagctatctgaccaacctgaatctctggagcagatc
ctggtggactgtagggataccctgaaatatggagtgagaacaggtcaccccaggtttttc
aatcagctatctactggcttagacatcattggcttgtcaggagaatggctcacctccact
gcaaacactaacatgttcacctatgagattgccccagtcttcgtgctcatggaacagctg
acgctgaagaagatgagggagatcattggctggcctgatggagagggcgatgggatcttc
tcaccaggtggagcgatatccaacatgtacagtgtgatgatcgcccgctacaagttcttc
cctgaagtcaagaccaaaggcatgactgctgcccccagactggtgctcttcacctccgag
catagccactactctataaagaaagccagtgctgctctgggctttggaacagaaaacctg
atcctgttgagcacagatgagagagggagagtcattcccgctgatttggaagccaaggtc
atcgatgccaaggcgaggggttgtgtcccaatgttcgtgaatgctacagctggttccaca
gtgtatggagcattcgatcccatccacgagattgcagacatctgcgagaaatacaacatg
tggttacatgtggatggtgcgtggggaggaggcctactgatgtccaggaagcacaggcac
aagctgtgtggcgtagagagggccaactcggtcacctggaaccctcacaagatgatgggt
gtgccactgcagtgttctgccattctggtcagagagaggggagttttatcaggctgcaac
tccatgtgcgctggctacctcttccaaccagacaaacagtacgatgtatcgtacgacacg
ggggacaaggccatccagtgtggacgacatgtagatatcttcaaattctggctcatgtgg
aaagcgaagggaacaatagggtttgaacagcacatcgacaagtgtttggacctctcgcat
tatctctacactaaaataaagggtcgcgagggctatcagatggtgttcgatggagagccc
cagcacacaaatgtctgcttctggtaccttccgccaggcattcgtgacatgcccgatggt
caggagaagagggagaagttgcataaggtggcccccaagatcaaggcattgatgatggag
tctggaactaccatggtgggctaccagcctcagggagacaaggtcaactttttccgaatg
gtcatctccaatcctgccgccaccaggtcagatatcgacttcttgaccgatgagattgag
agactggggcaggacttgtaa
DBGET
integrated database retrieval system