Oncorhynchus nerka (sockeye salmon): 115109100
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Entry
115109100 CDS
T07952
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115109100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
one04090
]
115109100
04091 Lectins [BR:
one04091
]
115109100
CD molecules [BR:
one04090
]
Proteins
115109100
Lectins [BR:
one04091
]
I-type lectins (Siglecs)
115109100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Ig_5
Ig_4
Ig_6
Lep_receptor_Ig
C2-set
C1-set
ICAM1_3_5_D2
Izumo-Ig
ICAM_N
Motif
Other DBs
NCBI-GeneID:
115109100
NCBI-ProteinID:
XP_029489555
EnsemblRapid:
ENSONEG00000031593
LinkDB
All DBs
Position
LG25:complement(5630326..5636773)
Genome browser
AA seq
423 aa
AA seq
DB search
MKKMQLLQLCAFFHVTVCSQIEEVAISPPGNEVFVLAGSAFQFTCVCVGSCKTPQFSWTR
ATTDSDRMRTKNSTLKFSKVKIEDAGRYTCDAKCDGSSEKKLKSVKMTVYAFSQPVLVMP
SILTENVACDVTCSVDAFDHVDSVHISWYLGSELLKDETQQTLDAANVSDTLTLTALRDY
TGKSLTCEVKADMRNNSKQVSYCLDIHYAPKINISASSSGMEEEEVVMSCRSDGNPTPTI
EWERKGELWPKNLHRHAQGNVTGRLHRSNQGVYQCVAKNGVSEAKEEMKLEVQYGPANTS
IQSFPLQAISYGVQLNLTCLSDMYPKAKQYIWTRIPDMALPKEAMVTNSHLIIDNFQEHH
QGIYECRVIHHSGNTERAFYTASVQAEPESKVFTQMVGAVAGSLVSGITGGIVAGFMLAK
WLK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatgcaacttcttcaactgtgtgccttcttccatgtcacagtctgtagtcag
atagaagaagtcgccatttcacctcctgggaatgaggtatttgtgctagcaggttcagcc
ttccagttcacctgtgtttgcgttggtagttgtaagacaccacagttcagctggacaaga
gctactactgactctgatcgtatgcgaaccaaaaacagcactctcaaattttccaaggtg
aagattgaggatgcgggtcgatatacctgtgatgcaaagtgcgatggcagttcagagaaa
aaactcaaatctgtcaagatgactgtctatgcttttagtcaacctgttttggtgatgcca
agtattttgacggaaaatgtggcttgtgatgtcacatgcagtgttgatgcatttgaccac
gttgacagtgtccacataagctggtatctaggaagtgagcttcttaaagatgaaactcag
cagactttggatgcagctaacgtgtcggacacactgactctcactgccctgagggactat
actgggaagagtctgacctgtgaagtgaaagcagacatgagaaataactcaaaacaggtt
tcttactgtctcgacatacactatgcacctaagatcaacatcagtgcttcctcatctggg
atggaagaggaggaagtggtgatgagctgtagaagtgacggcaaccccacccctactatt
gagtgggagagaaaaggggagctgtggcccaagaatctgcatcgacacgcacaaggaaat
gtcacgggccggctacaccgcagcaaccaaggggtttaccagtgtgtggccaagaacggg
gtgtccgaggcaaaggaagagatgaaactggaggtgcaatacggaccagcaaacacaagt
atccagtccttcccactgcaggccatttcctatggggttcagctgaaccttacctgcttg
tcagacatgtaccccaaagccaaacagtacatctggaccagaatcccagatatggcccta
cccaaggaggccatggttacgaacagccatttaatcatagataacttccaagagcaccac
caaggcatctatgagtgtagagtgattcaccacagtgggaatacagagagagcattctat
accgcctctgttcaagcggagcccgagtctaaggtgttcactcagatggtgggtgcagtg
gctggcagtcttgtcagcggaatcacaggaggcatcgtggcaggattcatgttagctaaa
tggctgaagtga
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