Oncorhynchus nerka (sockeye salmon): 115110990
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Entry
115110990 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00512
Mucin type O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
115110990
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115110990
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
115110990
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115110990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
115110990
NCBI-ProteinID:
XP_029492734
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Position
LG27:complement(8571908..8573445)
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AA seq
377 aa
AA seq
DB search
MCLLLELCEAVIWDTDHIPQDDSDCSANLQGDEMVIEPTKVLSISRSFLNSTWVPDEHYL
ELTQDYQRFRSTRKLLEYPLSCEEEYFPLAFSLVVHHKVENFERLLRAIYAPQNYYCVHV
DIKAKASFLASIKAITSCFENVFLASHPVSVVYASWSHVQADINCISDLYRASSHWKYFI
NLCGQDFPIKTNLEMVRSLWALAGDNRMESEARPRGKKSHWKKVHQVVDGKLQRTEQNKA
PPPFGIPILSGGAYIVVNRGFVRAVLEDSNVLALIRWDNETWSPDEFLWATIQRLPGVPG
SMRPKLDMTDMHAVARLVKWPWYKXGIYVKVMCVYGAGDLQWMLQQHHLFANKFDTDPIA
IRCLEEHLKHKALAEIY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctgttacttgaactctgtgaagcagttatttgggacaccgatcacatcccgcag
gatgacagtgactgcagcgccaacctgcaaggcgacgagatggtcatcgagccgactaag
gtcctgtccatttcacgcagcttcctcaacagcacgtgggtcccagacgagcactacctt
gagctgacccaggactatcagaggttcaggtctacgcgcaagttactggagtacccactg
agttgtgaggaagaatacttccccctggccttctcgctggttgtccaccacaaggttgag
aactttgagaggctgcttagagccatctacgccccccaaaactattactgcgtccacgtg
gatataaaggccaaagcgtcgttccttgcttccatcaaagccatcacatcctgctttgaa
aatgtgttcttggccagccatccggtcagtgtggtgtatgcgagctggagccatgtccag
gctgacatcaactgtataagtgatctgtacagggctagttcacactggaagtatttcatt
aacctctgtggccaggacttccccatcaagaccaacctggagatggtgcgcagcctgtgg
gcactggcgggggacaacagaatggagtcggaggccaggcccagaggtaagaagtcgcac
tggaagaaagtgcatcaggttgttgatggcaaacttcaaagaacagagcagaacaaagct
cctccgccctttggtatacccatcttgtcaggtggggcatacattgtggtgaataggggc
tttgtgcgtgctgtgctggaggacagcaatgtgttggctcttattcggtgggataatgag
acttggagtcctgatgagttcctgtgggccaccatccagaggcttcctggcgttcccggc
tccatgcgccccaagttagacatgacggacatgcacgccgttgccaggctggtgaagtgg
ccgtggtataaanggggtatctatgttaaagtgatgtgtgtatatggggccggagacctg
cagtggatgctgcagcagcaccacctctttgccaacaagtttgacacggaccccattgct
atcagatgtctggaggagcaccttaagcataaggccctggcagaaatatactaa
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