Oncorhynchus nerka (sockeye salmon): 115111985
Help
Entry
115111985 CDS
T07952
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04020
Calcium signaling pathway
one04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115111985
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115111985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115111985
Ion channels [BR:
one04040
]
Ligand-gated channels
Glutamate (ionotropic)
115111985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
115111985
NCBI-ProteinID:
XP_029494454
EnsemblRapid:
ENSONEG00000038972
LinkDB
All DBs
Position
LG27:37662602..37712586
Genome browser
AA seq
901 aa
AA seq
DB search
MRVFLLAFFISCSCAGGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANTLYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKNKNYENLDQLSYDNKRGPKAEKVLLFSQDTNLTSMLLEAKDLEARVIILSA
SEDEAASVYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEFNDD
GDRRFATYSILNYQKTRLVQVGIFNGTQVVMNPQRKIIWPGGETEKPRGYQMSTRLKIVT
IHQEPFVYVQPTTTDGTCQKEKTVNGLKDVQKVICTGPNGTIPGQPIVPQCCYGFCIDLL
IKLADTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNER
AQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRF
SPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMII
VASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMY
RHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMR
KDSPWKQNVSLSILSSHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGG
IVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPSVSTV
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtatttctgcttgcgtttttcatctcctgctcctgtgcgggtggtggatgtgaa
cccaagattgtcaatatcggagcggtcctgagccagaagaggtatgaacaggtgttcaag
gacgccgtcacccaggcaaacacgctgtatgggaaagataagttcaagatgaacgccatc
tctgtcactcataaacccaatgcaattcagatggctctctccgtctgcgaggacctcatc
tcgaaccaggtgtatgccattctggtgagccacccgcctcaatcgaatgaccatctgacc
cccacacccgtgtcctacaccgcagggttctaccgtatccctgtggttggactcaccacc
cgcatgtccatctattcggacaagagcatccacctgtctttcttgcgtaccgtgcccccc
tactcccaccaagcccaggtgtggttcgacatgatgagagagttccgctggaaccacatc
attctgatagtgagtgacgaccacgagggccgcgctgcccagaagaggctggagaccctg
ttggaggagagggagaccaagaataaaaacaagaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagttctcctgttcagccaagacaccaac
ctgacatccatgctgctggaggccaaggacctggaggctcgcgtcatcatcctctctgcc
agcgaggacgaagcggcgtcggtctacaaagctgcccgccagctcaacatgacgggctct
ggctacgtgtggctggttggagagagggagatgtctggtaaagctttgagtgaagcacca
gatggcttgctcggccttcagctcatcaacggcaagaacgagtcggcgcatatcaacgat
gccgtggctgtggtggcacagtccatccaggagctctttgagaaggagaacatcacagaa
ccgcctcgcggctgtgtaggcaacacaaacatctggaggactggaccgctcttcaaacga
gtgctgatgtcatccaagtacccagatggcctgacaggacgcatcgagtttaatgacgat
ggtgacaggcggtttgctacctacagcatcctcaactaccaaaagaccaggctggtgcaa
gtgggcattttcaacggcacccaagtggtgatgaatccgcagaggaagatcatttggcca
ggaggagagacggagaagccaagaggataccagatgtctaccagactaaagatagtaacc
attcatcaggagccatttgtctatgtccaacccacaacaactgacggaacttgccaaaaa
gagaaaactgttaatggacttaaagatgtccaaaaagttatatgcactggccccaatgga
accatcccaggacagcctatagtaccccaatgctgctacggcttttgcattgacctcttg
attaaactagcggataccatgaacttcacctatgaggttcatctggtggctgatgggaag
tttggtacacaggagcgggtgaacaacagcaacaagaaggagtggaacggcatgatggga
gaactcctgggtggcctggcagacatgattgtggctccgctcacgatcaacaacgaacgc
gcccagtacatcgagttctcaaaaccctttaaataccaggggcttaccatcctcgtgaaa
aaggaaataccacgcagtactttggattcgttcatgcagccctttcagagcaccctgtgg
ctgctggtgggtctatcggtccatgtggtggcggtgatgctctacctattagaccggttc
agcccatttggaaggtttaaagtgaatagcgaagaagaagaagaggacgccctcacctta
tcctccgccatgtggttctcttggggggtccttttgaactccgggataggagaaggagca
ccccggagcttttcagcaaggatcttaggtatggtgtgggctggatttgccatgatcatt
gtggcatcctacacagccaatctggcagccttcctagtgttggaccggcctgaggagcgc
atcaccggcatcaatgaccccaggctgcgaaacccatcagacaagttcatctacgccaca
gtgaagcagagttcggtggacatctacttccggcgccaagtggagttgagcaccatgtac
cgccacatggagaagcacaactacgaaagcgctgctgaggccatccaagctgtgcgcgac
aacaaactgcacgcgttcatctgggactctgccgtcctggagtttgaagcatcacagaag
tgtgacttggtgacaacgggagagctgttcttccgctccggcttcggcataggcatgcgg
aaggacagcccttggaagcaaaacgtttccctgtccattcttagctctcatgagaatggg
ttcatggaggaactagataaaacctgggtgagataccaggagtgtgactccaggagtaat
gccccggccaccctcacttttgagaacatggcaggtgtgttcatgttggttgctgggggt
atcgttgctggaatcttcctcatctttattgagattgcgtataagcgccacaaagatgcc
cgcaggaagcagatgcagctagccttcgctgcggtcaacgtgtggaggaagaacctacag
ccttatcccacggacatcacaggccagctcaacttgtcagacccctctgtcagcacggtg
gtgtga
DBGET
integrated database retrieval system
