Oncorhynchus nerka (sockeye salmon): 115117835
Help
Entry
115117835 CDS
T07952
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
Module
one_M00094
Ceramide biosynthesis
one_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115117835 (sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115117835 (sptlc1)
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
115117835 (sptlc1)
Amino acid related enzymes [BR:
one01007
]
Aminotransferase (transaminase)
Class II
115117835 (sptlc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
PAD
Motif
Other DBs
NCBI-GeneID:
115117835
NCBI-ProteinID:
XP_029502202
EnsemblRapid:
ENSONEG00000005931
LinkDB
All DBs
Position
LG4:1685991..1704129
Genome browser
AA seq
472 aa
AA seq
DB search
MASGQQWVLVEMVQALYEAPAYHLVLEGILILWIIRLLFSKTYKLQERSDLTEKEKEDLI
EEWQPEPLVPPMSKDHPSLNYDIVTGPPSHKIIVNGKECINFASFNFLGFLDNERVKQKA
LTSLRRYGVGTCGPRGFYGTFDVHLELEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKR
GDIVFVDEAACFSIQKGLQASRSFIKYFKHNDMEDLERLLKEQEIEDQRNPRKARVTRRF
IIVEGLYINTADVCPLPDLVKLKYKYKVRIFLEESMSFGVLGEHGRGVTEHFGVNIDDID
LISANMENAVASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPE
IFTILREKCKHVHKALQEIPGVKVIGEVYAPALHLQLERSSGSRDTDVRMLRSIVDYCLE
RQIALTLARYLDKEERFLPPPSIRVVVTIEQSEEDIEKAASCIREAALAILK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggcagcagtgggtgttagtggagatggtacaagcactctacgaggcacct
gcctatcatctggtcctggaggggatcctcatattgtggatcatcagactgctgttttca
aagacgtacaaactacaggagcgttcagacctcacagagaaggaaaaggaggacttaatt
gaagaatggcaaccagaaccccttgtccctcctatgtccaaagaccatccttccctcaat
tatgacatcgtcactggcccaccaagccacaaaatcattgtaaatggaaaagagtgcatc
aactttgcttcatttaacttcttgggtttccttgacaacgagcgagtgaagcaaaaggcc
ttgacttctctcaggaggtatggtgttggtacctgtggtccaagaggtttctatggaacc
tttgatgtccacttggagttagaggatcgtttggccaagttcatgaaaacagaggaggcc
atcatctattcctatggctttgcaacgatagctagtgctatacctgcctactccaagaga
ggagacatagtgtttgtggatgaggcggcatgtttctccatacaaaagggtctccaagcc
tcccgcagtttcatcaagtacttcaaacacaacgacatggaagatctggagagactgctc
aaagagcaggagatcgaggatcagaggaatcctcggaaggccagagtgaccaggaggttc
atcatagtggaggggctctatataaacactgcagatgtttgtccccttccagacctggtg
aagctgaagtacaagtacaaggtccgcatcttcctggaggagagtatgtcgttcggggtg
ctgggagaacatggcagaggggttacggaacactttggggtcaacattgacgatattgac
ctcattagtgccaacatggagaacgctgtggcttccatcggtggcttctgctgtggaagg
tcgttcgtcatagaccatcagcgtctgtcaggccaggggtactgtttctctgcctccctg
ccccccatgctggctgctgcagccatagaggcccttaacatcatggaggaagacccagaa
atttttaccatcctgagggagaagtgcaaacacgtccacaaagcgttgcaagagattcct
ggggtgaaggtaataggggaagtttatgcccctgcccttcacctacagctagagagaagc
tctggatccagagacactgacgtgaggatgcttcgcagcatcgtagattactgtttggag
agacagatcgcactcaccctagctcggtacttggataaagaggagcggtttctccctccg
ccttcgatccgggtagtggtcaccatcgagcagagtgaagaggacattgagaaagctgcg
tcctgtatcagagaggcagctctggctatcctcaaatga
DBGET
integrated database retrieval system
