Oncorhynchus nerka (sockeye salmon): 115118053
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Entry
115118053 CDS
T07952
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115118053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115118053
03036 Chromosome and associated proteins [BR:
one03036
]
115118053
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
115118053
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115118053
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
115118053
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115118053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
zf-C2H2_6
zf_C2H2_ZHX
zf-met
Motif
Other DBs
NCBI-GeneID:
115118053
NCBI-ProteinID:
XP_029502447
EnsemblRapid:
ENSONEG00000007269
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MSEEVIIVEWAESGASDEGCQAQLITDNAAVLPDSLVQNILVNTVVQGQEEDHELLDDNS
NDLYCEECHSSYKDQCDIQGSLSFMLDSPTPVGLPQRALLTLPHGLVVGRSSIPGAGLGV
LNQGAIVAPGMHFGPCEGEVTTRDRAVTSDYSWEVWNSKGESEYIDSARDTHSNWMRYVN
CARNEEEGNLIALQYRGIVFFHCCRSILPGDELLFWPGGRFIDRFRDPSDQIWLRKITPS
EVNTDLSSQVFPCCQCQLSFTTETYIQRHKEQFHPLDLSPASALSELENHLSKSNMNPDP
ILSSVRKLSYRCPQHPKSFKKKGHVQRTMRAVHSNVRPYCCPLCRKCFAQGYDLASHQLR
VHGRKKKTGVVEVRGESSLPPPDSAWEPEPPSNDQPTETQTGRASSQRLRDLRVKSTRNS
KAKTKANTPKQGETSTKKRFHSDPNPDALDMEEERIEAVGEAQYSCSDCQRTFGNPESLK
AHQCIRVVVGPPLYSCSTCRVTFKRYTTLKKHKVNKHPKENMLYCCTHCGRFFSQAAGLQ
HHLDAEVCKDIQLSSKAVPCSYCQFSFTEERYLRKHVKRHHPDEHVSQATGLGSGLIQSE
QKAGEVHLCLQCGQSYEHVQSFKAHRCFQSDAAKLHLCNDCGKSFSCFYSLKQHQRIHTG
EKPYRCSYCEKCFSHSGHLNVHVRIHTGEKSFLCTECGESFRQSGDLKRHERKHTGVKPC
TCPECGKSFSRPQSLKAHLMLHNGERQYKCDQCGKSFSRNYHLTRHHEKTHS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaagtgatcatcgtggagtgggcagagagtggtgcatcagatgagggatgt
caagcccaactcattacagacaacgccgcagtgttgcccgacagcctggtccagaatata
ttggtgaacactgtggtacaaggccaagaggaggatcatgaactactagatgacaacagc
aatgacctctattgtgaggagtgtcattcctcctacaaagaccagtgtgatatccaaggt
agtctgtccttcatgctggactctcccactccagtgggcttaccccagagggccctcctc
accctaccccacgggctggtggtgggcaggtccagtatccctggggcaggcctgggggtt
ctaaaccaaggagcaattgtggccccaggaatgcactttggcccctgtgagggggaggtg
actaccagggacagagcagtaacaagtgactactcctgggaggtttggaacagtaagggt
gaatctgagtacattgattctgcaagagacactcattccaactggatgaggtacgttaac
tgtgctcgtaatgaagaggagggtaatctcatagcactccagtacagggggattgttttc
ttccactgctgccgctccatcctcccaggagatgagctcctgttttggcctggggggcga
ttcatcgacaggtttagggacccctctgaccaaatctggctgcgaaagatcaccccttca
gaggttaatacagatttatcgtctcaggttttcccctgctgtcagtgccagctttctttc
accactgagacctacatccaaagacataaagagcaattccaccctctggacctatcacct
gcatctgcactgagtgagcttgaaaatcacctttctaaaagtaacatgaacccagaccct
atattgtcctctgtccgtaagttgagctaccggtgccctcagcatcctaagagctttaag
aagaagggccacgtccagagaaccatgcgagctgtccactccaacgtcagaccctactgc
tgccccctgtgcaggaagtgtttcgctcaggggtacgacctggcaagtcaccagctacga
gttcacggaaggaagaaaaagactggagtggtagaggtcagaggtgagagttcgctcccg
cctcctgacagcgcctgggaacccgagcctccgtccaatgatcaacctacagagacccag
acagggagagcttcctcacagagactgagggacctcagggtaaagtccaccaggaactct
aaagccaaaactaaggcaaacacaccaaaacaaggagaaaccagtaccaagaagaggttc
cattcagatcccaatccagatgctctggacatggaggaggagaggatagaggctgtagga
gaggcacagtacagctgcagtgattgtcagagaaccttcggcaacccagagtcccttaaa
gcccatcagtgcatccgggtcgtggtggggcccccgctgtactcttgttctacatgcagg
gttaccttcaaacggtacaccaccctgaagaagcacaaggtcaacaagcacccgaaggaa
aatatgctttattgctgcacccactgtgggaggttcttcagtcaggctgccggtctacag
caccacctggatgcagaagtatgtaaggacatacagctgagctctaaagctgttccttgc
tcctactgccagttctccttcaccgaggagaggtacctccggaagcacgttaagagacac
caccctgatgagcatgtctctcaggccacaggcctgggctcagggctaattcagtcggag
cagaaggcaggagaagtccacctgtgcttgcagtgtggacagagctacgagcacgttcaa
agcttcaaagctcaccggtgtttccagtcagacgcagccaaactgcacttgtgcaatgac
tgtgggaaaagtttctcttgtttctacagccttaagcagcatcagcggattcacacggga
gagaagccataccgctgctcttactgtgagaagtgttttagccactctggacatctgaat
gtgcacgtgaggatacacacaggggagaaatctttcctgtgtactgagtgtggagagagt
ttccgtcagtctggggatctgaagcgccatgagagaaaacacactggggtgaaaccatgt
acctgccctgaatgtgggaaaagcttcagtcgacctcagagtctgaaagctcacctgatg
ctgcacaacggagagagacagtacaagtgtgatcagtgtgggaaaagcttttcacgaaat
tatcacctgacgagacaccatgaaaagacacactcataa
DBGET
integrated database retrieval system
