KEGG   Oncorhynchus nerka (sockeye salmon): 115129493
Entry
115129493         CDS       T07952                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one00052  Galactose metabolism
one00510  N-Glycan biosynthesis
one00513  Various types of N-glycan biosynthesis
one00514  Other types of O-glycan biosynthesis
one00515  Mannose type O-glycan biosynthesis
one00533  Glycosaminoglycan biosynthesis - keratan sulfate
one00601  Glycosphingolipid biosynthesis - lacto and neolacto series
one01100  Metabolic pathways
Module
one_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
one_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:one00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    115129493
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    115129493
   00513 Various types of N-glycan biosynthesis
    115129493
   00515 Mannose type O-glycan biosynthesis
    115129493
   00514 Other types of O-glycan biosynthesis
    115129493
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    115129493
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    115129493
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:one01003]
    115129493
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115129493
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115129493
Enzymes [BR:one01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     115129493
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     115129493
    2.4.1.90  N-acetyllactosamine synthase
     115129493
Glycosyltransferases [BR:one01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   115129493
Membrane trafficking [BR:one04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    115129493
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   115129493
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 115129493
NCBI-ProteinID: XP_029515760
EnsemblRapid: ENSONEG00000000081
LinkDB
Position
LG5:13803802..13827418
AA seq 351 aa
MRDSVNFSVLHRTCKLVVLLCFFHISVTFIFYVRSLDFRFAFAKHDQTASKDTAPDAFET
NHFSVDNVTTITKELGKCPDTSPLLVGPLRIEFSNPVSLDVVRKENSNLKNGGRFKPKDC
VALQKVAIIIPFRNRDEHLKFWLYYLHPILQRQQLDYGVYVINQVGDEVFNRAKLLNVGY
SEALKEYDYGCFVFSDVDLIPMDDRNTYRCFSQPRHLSVSMDKFGFRLPYNQYFGGVSSM
SKEQFLKINGFPNNYWGWGGEDDDIFNRLNSKGMTISRPSGAVGKCRMIRHNRDGGNEDN
PQRFDRIAHTKETMNKDGIKTLSYKVVKVEKDQLYTKITVDVGEKMTPQTN
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcgggattcagtgaatttcagtgttctccatagaacctgcaagttggtcgtccttcta
tgttttttccatatttcggtcactttcattttttacgtgaggtcgttagattttcgtttt
gcatttgcgaagcacgaccaaaccgcatcaaaggacacagcaccggacgcgtttgaaacg
aaccacttttctgtagacaacgtgactacaatcaccaaagagcttggaaaatgtcctgac
acatcgccactgcttgttggcccactgcgaattgagttctccaacccagtcagcctggac
gtggtaaggaaggaaaactccaatcttaagaatggggggcgcttcaagcccaaagactgc
gtggccctccagaaggtggccatcatcatccctttccgcaaccgcgacgagcacctcaag
ttctggctctactacctccaccccatccttcagcgccagcagttggactatggcgtctat
gtcatcaaccaggtcggcgatgaagtctttaaccgtgccaagctcctcaacgttggctac
tcggaggccctgaaggagtacgactacggctgctttgtgttcagtgacgtggacctcatc
cccatggatgaccgcaacacctacaggtgcttcagccagcccaggcacctgtctgtttcc
atggacaagtttggcttcagattgccgtacaaccagtacttcggaggcgtgtcgtcaatg
agcaaggagcaattcctcaagatcaacggcttccccaacaactactggggctggggagga
gaggacgacgacattttcaacaggctgaactccaaggggatgaccatctcacggcccagc
ggagccgtggggaaatgcaggatgatccgccacaaccgggacggtgggaacgaagacaac
ccacagaggttcgaccgcatcgcccacaccaaggagaccatgaacaaagatggcatcaaa
accctgtcgtacaaagtggtcaaagtggagaaggatcaattatacaccaaaatcactgtg
gacgtgggggaaaaaatgactccgcaaaccaattaa

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