Oncorhynchus nerka (sockeye salmon): 115129493
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Entry
115129493 CDS
T07952
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00052
Galactose metabolism
one00510
N-Glycan biosynthesis
one00513
Various types of N-glycan biosynthesis
one00514
Other types of O-glycan biosynthesis
one00515
Mannose type O-glycan biosynthesis
one00533
Glycosaminoglycan biosynthesis - keratan sulfate
one00601
Glycosphingolipid biosynthesis - lacto and neolacto series
one01100
Metabolic pathways
Module
one_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
one_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
115129493
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
115129493
00513 Various types of N-glycan biosynthesis
115129493
00515 Mannose type O-glycan biosynthesis
115129493
00514 Other types of O-glycan biosynthesis
115129493
00533 Glycosaminoglycan biosynthesis - keratan sulfate
115129493
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
115129493
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115129493
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129493
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115129493
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
115129493
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
115129493
2.4.1.90 N-acetyllactosamine synthase
115129493
Glycosyltransferases [BR:
one01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
115129493
Membrane trafficking [BR:
one04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
115129493
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115129493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
115129493
NCBI-ProteinID:
XP_029515760
EnsemblRapid:
ENSONEG00000000081
LinkDB
All DBs
Position
LG5:13803802..13827418
Genome browser
AA seq
351 aa
AA seq
DB search
MRDSVNFSVLHRTCKLVVLLCFFHISVTFIFYVRSLDFRFAFAKHDQTASKDTAPDAFET
NHFSVDNVTTITKELGKCPDTSPLLVGPLRIEFSNPVSLDVVRKENSNLKNGGRFKPKDC
VALQKVAIIIPFRNRDEHLKFWLYYLHPILQRQQLDYGVYVINQVGDEVFNRAKLLNVGY
SEALKEYDYGCFVFSDVDLIPMDDRNTYRCFSQPRHLSVSMDKFGFRLPYNQYFGGVSSM
SKEQFLKINGFPNNYWGWGGEDDDIFNRLNSKGMTISRPSGAVGKCRMIRHNRDGGNEDN
PQRFDRIAHTKETMNKDGIKTLSYKVVKVEKDQLYTKITVDVGEKMTPQTN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgggattcagtgaatttcagtgttctccatagaacctgcaagttggtcgtccttcta
tgttttttccatatttcggtcactttcattttttacgtgaggtcgttagattttcgtttt
gcatttgcgaagcacgaccaaaccgcatcaaaggacacagcaccggacgcgtttgaaacg
aaccacttttctgtagacaacgtgactacaatcaccaaagagcttggaaaatgtcctgac
acatcgccactgcttgttggcccactgcgaattgagttctccaacccagtcagcctggac
gtggtaaggaaggaaaactccaatcttaagaatggggggcgcttcaagcccaaagactgc
gtggccctccagaaggtggccatcatcatccctttccgcaaccgcgacgagcacctcaag
ttctggctctactacctccaccccatccttcagcgccagcagttggactatggcgtctat
gtcatcaaccaggtcggcgatgaagtctttaaccgtgccaagctcctcaacgttggctac
tcggaggccctgaaggagtacgactacggctgctttgtgttcagtgacgtggacctcatc
cccatggatgaccgcaacacctacaggtgcttcagccagcccaggcacctgtctgtttcc
atggacaagtttggcttcagattgccgtacaaccagtacttcggaggcgtgtcgtcaatg
agcaaggagcaattcctcaagatcaacggcttccccaacaactactggggctggggagga
gaggacgacgacattttcaacaggctgaactccaaggggatgaccatctcacggcccagc
ggagccgtggggaaatgcaggatgatccgccacaaccgggacggtgggaacgaagacaac
ccacagaggttcgaccgcatcgcccacaccaaggagaccatgaacaaagatggcatcaaa
accctgtcgtacaaagtggtcaaagtggagaaggatcaattatacaccaaaatcactgtg
gacgtgggggaaaaaatgactccgcaaaccaattaa
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