Oncorhynchus nerka (sockeye salmon): 115130432
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Entry
115130432 CDS
T07952
Name
(RefSeq) succinate--hydroxymethylglutarate CoA-transferase-like isoform X1
KO
K18703
succinate---hydroxymethylglutarate CoA-transferase [EC:
2.8.3.13
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115130432
Enzymes [BR:
one01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.3 CoA-transferases
2.8.3.13 succinate---hydroxymethylglutarate CoA-transferase
115130432
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Gene cluster
GFIT
Motif
Pfam:
CoA_transf_3
Motif
Other DBs
NCBI-GeneID:
115130432
NCBI-ProteinID:
XP_029517437
EnsemblRapid:
ENSONEG00000027307
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Position
LG6:complement(20002960..20169243)
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AA seq
449 aa
AA seq
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MSKIPTRVKCGAFVRLLASGIQPCMFRQHQSIRTNLRRLLSNTQPGENVRPLEGVKVLDL
TRVLAGPFATMILGDLGAEIIKVERPGAGDDTRSWGPPFVGDESAYFLSVNRNKKSVAVN
LKDPRGAKIILELAGMCDVLVENYLPGKLDQMGLGYDDVHKAAPRLVYCSISGYGQTGPL
SQRPGYDSIASAVSGMMHITGPEDGDPVRPGVAMTDLATGLYAHGAIMAALLQCHRTGRG
VHIDCNLLSTQVACLTHIAANYLNAGKEARRWGTAHESIVPYQGFRTKDGYLVVAAGNDK
QFIKVCKMLGLNHLSDEPKYKSNTLRVQHRQELLHILSQRFLEELTGEWLRRFEGTGVPC
GPINNIQQVFSEPQVATNGLILEMNHPTAGKIAVPGPAVRFSTFESREPMPPPVIGQHTV
QVLRDSLSYNDDVINQLLASGTVAQNEVH
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagataccaacacgcgtcaagtgcggtgcatttgttcgactcttggctagcggg
attcaaccctgtatgtttcgacaacatcaaagtattcgcactaatctcaggcggctgctt
tccaacacacagccaggagagaatgttcgaccactggagggtgttaaagtcctagacctc
acaagggtcctggctggtccatttgccacaatgatactgggagacctgggtgctgagatt
atcaaagttgagagaccaggtgctggggacgacaccagatcatggggacctccgtttgtt
ggtgatgagagtgcttattttctcagtgtgaacagaaacaaaaagagtgttgctgtaaat
ctcaaagacccaagaggagccaagataatcttagagcttgcagggatgtgtgatgtcctt
gtggaaaactatctacctggaaagcttgatcagatgggccttggctacgacgatgtacac
aaagcagccccgagactggtgtattgctctatttcaggctatggacaaactgggccgctg
tcccagcgaccagggtatgactcaatcgcctctgctgtctctggcatgatgcacatcacc
ggccctgaggatggggacccagttaggccgggcgtcgcaatgactgacctggccacagga
ctctatgcccacggagccatcatggccgccctgctgcagtgtcacaggacaggaaggggt
gttcacattgactgcaacctgctttccacccaggtggcttgtctcacacacattgctgca
aattacctcaatgctgggaaggaagccaggagatggggaacagcccatgagagcatcgtt
ccatatcagggtttcagaaccaaagacggatacctggttgtggctgcgggcaacgacaag
cagtttatcaaagtgtgcaaaatgctaggcctgaatcatctgtctgacgagcccaagtac
aaaagcaacacactcagagtgcagcatcgccaagagctgcttcacatcctctcccagagg
ttcttggaagagttgacaggcgagtggctgaggaggtttgaggggacaggcgtgccctgc
ggccccatcaacaacatccagcaggtgttctccgaaccacaggttgcaaccaatggcctt
atactggagatgaaccacccaacagctggaaagattgcagtaccagggccagcggtccga
ttcagcacctttgagagcagggagccgatgccccctcccgtgattggtcaacacactgtg
caagttctcagagacagcctgtcctataatgatgatgtcatcaatcagctgctggcatca
gggacagttgcccagaatgaagtgcattga
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