Oncorhynchus nerka (sockeye salmon): 115137427
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Entry
115137427 CDS
T07952
Name
(RefSeq) transcription factor E3-like isoform X1
KO
K09105
transcription factor E3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115137427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115137427
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
115137427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
115137427
NCBI-ProteinID:
XP_029529609
EnsemblRapid:
ENSONEG00000032120
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All DBs
Position
LG2:complement(29009915..29025140)
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AA seq
470 aa
AA seq
DB search
MYIFLPLSSLSCLNGGIQPNRAMSSRVLLRQQLMREQAQEQERREAQQQNSVAQLRATDS
TPAIYVTLPPMAARKPPAQVPVEVLKVQSHLENPTKYHIQQSQRQQVKEYLSTTLGNKVA
PQILGVSPLPLSSSAPEMTPTALSAPNSPMALLNLGSKKEEIDGVIDDIISLESSFNDDF
MTLIDLGLQLPSTLPGNLLDVYHSPGMAAPTLTVSNSCPADLTNIKREYSDTKALVKERQ
KKDNHNLIERRRRFNINDRITELGAIIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRA
KEVEMRQKKLEHANHSLMLRIQELEIQAQLHGLSSPMSHGLSSDPSLLQQQHLQQGDHKL
GPSAGEACSQTFLSLGAAAMAQPVLTSSPPSSDSPVVVTISNPLDLGSVSFTELDDPSNA
GLYLDVGLGDIIMDEGYTLSPERVDPLFFVSPGASKTSSRGSSFSMEEDL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtatatattcttacctctctcttccctctcctgtttgaatggaggcatacaacccaac
cgagctatgtcgtcgcgtgtgctgcttcggcagcagctgatgcgggaacaagcccaggaa
caagagagacgggaggcccagcagcagaactctgtggctcagctcagggcaactgactcc
acccctgccatctatgtcactctgcccccaatggctgctcgcaagccacccgcacaggtg
cccgtggaggtgttgaaggtgcagagccatctggagaaccccaccaagtatcacatccag
cagtctcagaggcagcaggtgaaggagtatctctccaccaccctcggcaataaggtggca
cctcaaatcctcggtgtatctcccttgccactgtctagctctgcccctgagatgactccc
acggccctcagtgctccaaacagcccaatggctttactcaatctgggatccaagaaagag
gagatagatggcgtaattgacgacatcatcagccttgaatcaagtttcaatgatgacttc
atgacgttaattgacttgggtctacagctgcctagtacactccctgggaacctcctggat
gtataccatagtcctggaatggcagcacctaccctcaccgtcagcaactcctgccctgcg
gatctgaccaatattaaaagggaatactctgataccaaagcgctggtgaaagagagacag
aagaaggacaaccataacctcattgagaggaggcggaggtttaacatcaatgaccgcata
acggagcttggggccataatacccaagtcaagtgacccggagatgcgctggaataagggc
accattctgaaggcctcggtggactacatcaggaagctgcagaaggagcagcagagagcc
aaggaggtagagatgcgtcagaagaagctggaacatgctaaccacagcttgatgctgcgc
atccaggagttggagatacaggctcagctccatggcctctccagtccgatgtcccatggc
ctgagttcagacccctccctccttcagcagcagcaccttcagcagggagaccataaactg
gggcccagcgctggagaggcctgctcccaaacctttctcagcctgggggcagcagccatg
gcacagcctgtccttacctcctccccaccttcctctgactcccctgtggttgtgaccata
agcaaccccctggacctgggcagtgtgagcttcaccgagctggatgacccctccaatgct
gggctgtacctagacgtggggctgggggacatcatcatggacgaggggtacacactgtcc
ccagagagggtggacccactgtttttcgtgtcaccaggtgcctcaaagaccagcagtcgt
gggagcagcttcagtatggaggaggacttgtag
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