Oncorhynchus nerka (sockeye salmon): 115139262
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Entry
115139262 CDS
T07952
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139262 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115139262 (esr1)
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
115139262 (esr1)
Nuclear receptors [BR:
one03310
]
3. Estrogen like
3A. Estrogen receptor
115139262 (esr1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
115139262
NCBI-ProteinID:
XP_029532303
EnsemblRapid:
ENSONEG00000032260
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Position
LG13:complement(7621613..7645274)
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AA seq
619 aa
AA seq
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MLVRQSHTQISKPLGAPLRSRTTLESHFISPPKLSPQQPTTPNSNMYPEETRGGGGVATF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPF
LHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSAAGSGVRVF
EMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRNRRKS
CQACRLRKCYEVGMVKGGLRKDRGGRLLRKDKRYWGPAGDREKPYGDLEHRAAPPQDGGR
NSSSSSLNGGGVWRGPRITMPPEQLLFLLQGAEPPALCSRQKVARPYTEVTMMTLLTSMA
DKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIPSPGKLIFAQDLIL
DRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSVESLH
NSSAVESMLNNITDALIHHISQSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYSIKC
KNKVPLYDLLLEMLDGHRLQSPGKVAQAGEQIEGPSTTTTTSTGSSIGPMQDSQDTYIRS
PGSGVLQYGSPSSDQMPIP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacttcatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggaggtggtggggtggccaccttt
aactacctggacggagggtatgactacacagcccctgcccaaggcccggcccccctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagccccttc
ctccaccccccaagccaccatggtctccccagccagtcatactacctggagacctcgtcc
acacccttatacaggtcgagtgtggtaaccaatcagctgtcagcgtcagaggagaagctc
tgcatcgcctccgataggcagcagtcgtacagtgcagcagggtcaggggtcagggtgttt
gagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcctctgggtaccac
tacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagcatccaaggtcac
aatgactacatgtgccctgcgactaaccagtgtacaatggacaggaatcgtaggaagagc
tgccaggcatgccgcctcagaaagtgttatgaagtggggatggtgaaaggaggcttgcgt
aaggaccgcggtgggcggcttctcaggaaggataagcggtattggggccctgctggtgac
agagagaaaccctacggtgacctggagcacagggcagcgccccctcaggacgggggtagg
aacagcagcagcagcagtctcaatggaggtggagtatggcgtgggcccagaatcaccatg
cctcctgaacagttgctgttcctgctgcagggggcagagcctccggccctgtgttctcgt
cagaaggtggcccgcccctacacagaggtcaccatgatgaccctgctcaccagcatggct
gacaaggagctggtgcacatgatcgcttgggctaagaaagtaccaggtttccaggagctg
tctctccatgaccaggtgcagctgctggagagttcctggctggaggtgctgatgatcgga
ctcatatggcggtccatccccagccctgggaaactcatcttcgcccaggacctcatactg
gacaggagtgaaggggactgtgtggagggtatggctgagatcttcgacatgctcctggcc
actgtgtctcgcttccgcatgcttaaactgaagcctgaggagtttgtgtgcctcaaagcc
atcatcttgctcaactctggtgccttctccttctgttctaactctgtggagtccctccac
aacagctcggcagtggaaagcatgctgaacaacatcaccgacgccctcatccaccacatc
agccagtcaggagcctctgtgcagcagcagcccagacggcaggcccagctcctgctcctg
ctctcacacatcagacatatgagcaacaaaggcatggagcacctttacagcataaaatgt
aagaacaaagttcctctgtacgacctgctcctggagatgctggacggtcaccggctccaa
tccccaggcaaagtggcccaagctggggaacagatcgagggcccctctaccaccactacc
acctccacaggctccagcatagggccgatgcaagacagccaggatacctacatcagaagc
cctggttccggggtactccagtatggctcccccagctcagaccagatgcccattccgtga
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