Oncorhynchus nerka (sockeye salmon): 115140023
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Entry
115140023 CDS
T07952
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04217
Necroptosis
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115140023
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115140023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115140023
03029 Mitochondrial biogenesis [BR:
one03029
]
115140023
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115140023
Enzymes [BR:
one01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
115140023
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
115140023
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
115140023
RhoA-dependent endocytosis
115140023
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
115140023
Retention of mitochondria
115140023
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115140023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
T3SS_needle_E
Motif
Other DBs
NCBI-GeneID:
115140023
NCBI-ProteinID:
XP_029533873
EnsemblRapid:
ENSONEG00000034949
LinkDB
All DBs
Position
LG13:49889659..49906709
Genome browser
AA seq
699 aa
AA seq
DB search
METLIPIINRLQEVFLTVGAEIIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVPPLAERRLQENGNGVKQNANSYPGIKADEWGTFLHSKNQIFTDFLEIRKE
IEEETERSSGGNKGISPEPIYLKIFSPHVLNLTLVDLPGITKVPVGDQPEDIEAQVQEMI
LSFISNPNSLILSVSPANSDLATSDALKLAREVDQDGRRTLLVVSKLDLMDAGTDALEVL
LGRVIPVRLGIVGVVNRSQHDINTQKSIEDTARDEQAFLQRHYPSLASRCGSRYLARTLS
RLLMHHIRDCLPELKRRVTVLSAQYQARLSSYGQPVEDHSSTLLQIVTKFASDYCNTIEG
TATHIQTSELCGGARICYIFHETFGRTLQSIDPLGGLTELDILTAIRNATVIPISSNRIV
CVNHMSYVNRGVCCAVLQGPRPALFVPEISFELLVKRQIKRLEEPSLRCVELVHEELQRI
IQHCSSYSTQELLRFPKLHDSIVEVVTSLLRKRLPITNDMVHNLVQIELAYINTKHPDFT
DAAQVSASVNSQQGLQDGDKCWMNEKVAEEKAPVAGFSSPVKGQAINLLDTAVPVSRKLS
AREQRDCEVIQRLIKCYFLIVRKSIQDSVPKTVMHFLVNFVKERLQSELVGQLYKQNLLQ
GLLIESQDTAQQRTEVAQMLEALQKASNIISEIRETHLW
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggagactctaattcccatcatcaatcggctccaggaagtcttcctgacagtgggggca
gagatcatccagctgcctcagatagtggtggttggctcgcagagcagcggcaagagttct
gtgttggagagtctggttggaagggattttctgcctcggggatcaggcatagtcacacgg
cgacccctagtgttgcagctggtgaatgtgcctccattggcagagaggagactgcaagaa
aatggaaatggggtaaaacaaaatgcaaacagctacccagggatcaaggctgatgaatgg
ggcacgttccttcatagcaagaaccagattttcacagatttcttggagattcgcaaggag
attgaagaagagactgagcgtagctcaggaggcaacaagggaatcagccctgagcccatc
tatttgaagattttctctcctcatgtcctcaatctcacactggttgatttgccaggaata
accaaggttccggttggagatcagccagaggacatagaggctcaagtccaagagatgatc
ctatccttcatctccaaccccaactcccttatcctctcagtgtctcctgccaactccgac
ttggccacctctgatgccctcaaactggcccgcgaggtcgaccaggatggccgcagaaca
ctgctggtggtcagtaagctggacctgatggacgcagggacagatgctctggaggtcttg
ctgggccgggtcattccagtgcggctcggaattgtgggagtggtcaacaggagccagcat
gacatcaacacgcagaagagcatagaggacacggcacgggacgagcaggccttcctccag
cgccactacccgtctctggcctcccgctgcggctcccgctacctggctcgcaccctgagc
cgcctgctcatgcaccacatcagggactgcttgccggagctgaagaggcgtgtgacggta
ttgagtgcccagtaccaggcccggctcagcagctacggccagcctgtagaggaccacagc
tccaccctgctacagatcgtcaccaagttcgccagcgactattgcaacaccatcgagggc
accgccacgcacatccagacatctgaactctgcgggggggctcggatctgctacatattc
catgagacctttggccgcactcttcagtctattgaccccctggggggcttgacggagctc
gacatcctcactgcaatccgcaatgctacggtaataccaatcagctccaatcgcattgtc
tgtgtgaatcacatgagttatgttaatagaggtgtgtgttgtgctgtgctgcagggtccg
cggccggccctctttgtacctgagatttcctttgagctgctggtgaagaggcagatcaag
cgtctggaggagcccagtctgcgctgtgtggagctggtccacgaggagctgcagaggatc
atccagcattgctcctcctacagcacgcaggagctccttcggtttcccaagctgcacgac
tccattgtggaggtggtgactagtttactcaggaagcgcttgcccattactaatgacatg
gtccacaacttggttcaaattgagcttgcttacatcaacacaaagcacccagacttcacc
gatgctgctcaggtctcagcatctgtcaacagtcaacagggcctgcaggatggagataaa
tgctggatgaatgagaaggtggctgaggagaaggcaccagtggcaggtttcagcagccct
gttaagggccaggccatcaacctcctggacacagcggtgccggtgtcccgaaagctgagt
gcccgcgagcaaagagactgtgaggtcattcaacgccttatcaaatgctacttcctaatt
gtccgcaagagcattcaggacagtgttcccaagacggtgatgcacttcctggtgaacttt
gtgaaggagcgtctgcagagtgagctggtgggccagctgtacaaacagaacctgctacag
gggctgctcatcgagtcccaagacacagcacaacagaggacagaggtggcccagatgctg
gaggctctccaaaaagccagcaacatcatctcagagatccgggagacacacctgtggtag
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