Oncorhynchus nerka (sockeye salmon): 115142736
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Entry
115142736 CDS
T07952
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115142736
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115142736
04261 Adrenergic signaling in cardiomyocytes
115142736
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115142736
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115142736
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
VWA_CoxE
Cache_3-Cache_2
PsbU
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
115142736
NCBI-ProteinID:
XP_029538269
EnsemblRapid:
ENSONEG00000027890
LinkDB
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Position
LG15:13373411..13462757
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AA seq
1097 aa
AA seq
DB search
MAICTPSCSIVCLVSFQIILIFNVQWPGADGLTFPQQYTIMHWARRIEQEIDRVFQHISG
AQQLKGIYNEKRRQFSLVKNSPYEMVEKVASDIEKLLAKKRKALDRLASEAERVQRDHPW
HDSVKEWNMTYYDSKAELDYQYSLQDGDGETVSPPLQVEFVYDPNFKNKVNYSFTAVQIP
TDIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPATPWRAPDKI
DLYDVRRRPWYIQGASSPKDMIILVDVSGSVSGLTLKLIKSSVMEMLDTLSDDDYVNVAR
FNEKAEAVVPCFKHLVQANVRNKKIFKEAVKLMQAKGTTDYKSGFHFAFNQLLNKTNVPR
AHCNKIIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGFY
FEIRSICAIRINTQEYLDVLGRPMVLAGSRAKQVQWTNVYQDALGLGLVFTGTMPVFNLT
VDGNSQNQLILGVMGVDVHLDEIKKLTPRYNLGANGYIYAIDPNGYLLLHPNLHPKLLDL
PEPVTLDFLDAEVEDSSKQEIRKHMIDGRPGDMQIKTLVKSIDERYIDEGVRSYTWTPIN
GTDYSLGLVLPPYSEYYIQADLSDVMLQLQYLQSLLPSSFESGGHVFLAPREYCKRLHIS
DNNTQFLENFLSLMVEITPESEDCDQGLIHNLILDSGIIWQLASRVWKNKDIQTYGFLAL
FAATDGGVTRVFPNSAAESWDEDPEPFNSNYYRRSLDNKGYMFRAPPRASMDDPVTSENG
TIGILVSTAVEVNLGGKNLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGSQKCGPSRSC
EMDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGDVDPYLMHALYNNSIYARRQS
FQYQSACEPVSSSHTGAAPRGIFVPSIADMLSLAWWTSAAAWSVVQQLLYGLAYNSWLYT
GDVLADGFDQKESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAE
TLPCSSCEIERLTQVKTEFQEEDPCEVLNSARYRRGPTECWDYNIWENTSECGRGHSLQS
SIGILFSIQLILTLLSL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatgcactccgtcttgcagcattgtctgcttggtatctttccagattatcttg
attttcaatgtacagtggcctggcgccgatggtctcacgttcccccagcaatacacaata
atgcactgggccaggcgcatcgagcaggagatcgacagagtcttccagcacatcagcgga
gcccagcagctaaaagggatctacaatgagaaaagaaggcagttcagcctggtaaagaat
tctccttatgagatggtggagaaggtagcgtcagacatcgagaagctactggccaagaaa
cgcaaagcacttgataggctggccagtgaagcagaacgtgtccagcgagaccatccctgg
cacgacagcgtcaaggagtggaacatgacgtattacgattccaaggcagagctagactat
cagtactctctgcaagatggtgatggggaaacagtgagccctccactacaggtggagttt
gtgtatgaccctaacttcaaaaataaggtcaactactccttcacagccgttcagatcccc
acagacatctacaaaggagccccagtgattctaaatgagctgaactggacccaggcgctg
gagaaggtgtttatggagaacagtcaagaggatccttcactactctggcaggcattcggt
agcgccactggggtcactcgctactacccagccacaccgtggagggcccctgataagatc
gacctttatgatgtgaggagaaggccatggtacatccaaggggcttcatcccccaaagac
atgatcatactcgttgatgtgagtggcagtgtgagcggcctcactttgaagctgatcaag
tcatcagtgatggagatgctggacactctgtctgatgacgactatgtcaacgtggccagg
tttaatgaaaaggctgaggcagtggtcccttgcttcaaacacctggtccaggccaacgtt
cgcaacaagaagatcttcaaagaggctgtaaagctcatgcaagctaaaggcaccacagac
tacaagtctggtttccactttgccttcaatcagctactaaacaagacgaatgtcccgcga
gctcactgcaataaaataatcatgctgttcactgatggaggagaggatcgagctcaggac
atctttgagcagtacaattggcccaacaaaacggtgcgggtctttacattctctgtgggg
cagcacaactatgatgtcacacccttgcaatggattgcgtgtgccaataaaggtttctat
tttgagatccgctccatctgtgccataaggattaacacccaggagtacctggatgtgctg
ggccgccccatggtcctggcaggcagccgtgccaagcaggttcagtggaccaatgtctat
caggatgccttgggtctgggacttgtttttactgggaccatgcccgtttttaatctcacc
gtggatggaaactcacagaatcagctcatattaggtgtcatgggggtggacgtgcatctg
gacgaaatcaaaaagctgacgccccgatacaaccttggagccaatgggtacatatacgcc
attgacccaaatggataccttctcctgcatccaaaccttcacccaaagctgctcgaccta
ccagagcctgtaacacttgacttcctggatgctgaggtggaggacagttccaaacaggaa
atccgcaaacatatgattgatggcagaccgggtgacatgcagattaagacgcttgtaaaa
tcaattgatgagcgatacatagatgagggagttcggagttacacctggacacccatcaat
ggtacagactacagtctgggcctagtactgccgccctacagtgaatactacatccaggca
gacctgagtgatgtgatgctgcagctccagtatctgcaatctttgctgcccagctccttt
gaatcagggggacacgtgttcctggctcccagggaatactgcaagcgtctgcacatctct
gacaacaacacacagttcctggagaacttcctatctcttatggtggagatcacaccagaa
tctgaagactgtgatcaaggcctcattcacaacctgatcttggattctggaatcatctgg
cagctagcatctagagtgtggaagaacaaggatatccaaacgtatggtttcctggcatta
tttgcagccacagatggaggtgtaacccgggtcttccccaactcggctgctgagtcgtgg
gatgaggaccctgagcccttcaactctaactactaccgccgcagccttgacaacaagggc
tatatgttcagagctccacccagagcctccatggatgatccggtgacctcggagaacggc
accatcggaatcctggtcagcactgccgtggaagtcaacctgggaggcaagaacctgaaa
ccggcagtggtgggggtgaagctagacttggaagcatgggtagacaagttcaagatcttg
gccagcaacgtgtctgacagtcgtcagggctcgcaaaagtgtgggccatccagaagttgt
gagatggactgcgaagtcaacactgatgacttactctgctatctgattgacgatggtggc
ttcctggtgatgtccaaccagagggatcactggaaaaaggtgggccttttctttggtgat
gtggacccctatcttatgcacgcgctgtataacaactccatctatgcccgccggcagtct
tttcagtaccagtcagcatgtgagccagtcagcagcagccacacaggggcagcacccagg
ggcatctttgtgccctccatcgccgacatgctcagtctggcctggtggacatcggcggca
gcatggtctgtagtccagcagctgctctatggactggcctacaacagttggctctacaca
ggtgatgttctggcagatgggtttgaccagaaggagagcagctgtgtgaccatccaaagc
cagttctacttcaccaacaccaccaactcatacaatgtgctgcaggactgtgggaactgc
tccaggttatttcatgctaagaggatagagaacaccaacctgttgtttgtggttgctgag
acactgccctgtagctcctgtgagattgagagactgacccaggtcaaaacggagttccag
gaggaggatccctgtgaggtgttgaactctgcacgctaccggagaggcccgaccgaatgc
tgggactacaacatctgggagaacacatcggagtgtgggagaggccattccctacaatct
tcaataggaatccttttctctatccagctgatcctgactcttctctctctctga
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