Oreochromis niloticus (Nile tilapia): 100691717
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Entry
100691717 CDS
T06104
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A isoform X2
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04020
Calcium signaling pathway
onl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100691717
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100691717
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100691717
Ion channels [BR:
onl04040
]
Ligand-gated channels
Glutamate (ionotropic)
100691717
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF2107
Motif
Other DBs
NCBI-GeneID:
100691717
NCBI-ProteinID:
XP_005451476
Ensembl:
ENSONIG00000004096
UniProt:
I3J8H3
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Position
LG7:complement(26960094..27012656)
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AA seq
1220 aa
AA seq
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MMKSVGMVMMSGPAARPGTRVLPLICLVLCALIFLPICAHSHPQPCQVLKRIGHTVRIGA
LHVQPRLLSARAVSGSEDWGNERELTEEQQLELERPFKTSASAPGYGSLRTRASVNSQRG
ANRSKSQARQREENTSTENRVFAPRDSVLLAVEALNRAGLLPYNLSLEIVMAVGSTLGEL
PAFSFSSTGNPENEDPLSFVESVCHTVVVQGVSAMIAFPRNRDEFVKLEFVSLALQVPVV
SVVQREFSRHSKNPLHFQMAMRTVEAPQSQLLYTLLMMNGWWDISILLCQEWNISDFLFL
IKNNTRFHLGTLVNLTTIALTSSVSSSALSTSAVASDQQQTLLRQLEALREHSSTTGLVT
FGCDIREVRRLWTLVTRMTRPEFHWVLGDSQNVAELRTEGLPMGLLAHGVMGSPSLDHYV
HDSLELVARAVGSAAQDNPALALIPGTTNCMDKQQSNGSSGEYLARFVANTSFEGQSGFI
SSNSQSQNVISEAHHYIWSLQLDPLGQPTWTRLGRWRRGRILMDPAAWPNHPGSGGGGDW
RRPPRLHMRVVTLVEHPFVFTREVDSDGLCPAGQLCLDPLTNESSVLEGLFQNLRGTNGS
VPTDLKKCCYGYCIDLLEKLGEDMGFTFDLYIVGDGKYGGFKNGRWTGLVGDLLSGAAHL
AVTSFSINSARSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWSMWLGIFVSLHV
TAIFLTLYEWHSPFGMTPRGRNRNRVFSFSSALNVCYAILFGRTVAIKPPKCWTGRLLMN
LWAIFCLFCLSTYTANLAAVMVGEKTYEQLSGIHDPKLHHPSQGFRFATVRESSAEDYVK
KSFPEMHEYMRRYNVPATPDGIHHLKADPQKLDAFIMDKALLDYEVSIDADCKTLTVGKP
FAIEGYGIGLPQNSPLTSNISELISQYKSDGFMDMLHDKWYKVVPCGKRSFAVTETLQMG
IKHFSGLFVMLCVGVALSLLTTIAEHIVYKLVIPRVKEPRFKYWLHTSQRLHRALNSVFT
DDKLPTITKPEKRCNEGNNQSAPWNPAESSHCNRRRILPQEMQNDLERPSSQDLPPPPPP
SPLPHPHSLPLLEKPLPIVTTSNGRSDLLGRGLDQGLGPGQGGSGQCRALGVGDCGPGLG
VGRNPLVQELSELESQILVIKQQLQSAMRRKRELEQYQSENQQANQTAPSQPTSHQSNQF
VQYTQTHQQTNQHKNTCPEF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtcggtggggatggtgatgatgagtggcccggcagcgcgaccaggcaccagg
gtcttgccactaatatgtttagtgttgtgcgctctcatctttctccctatttgcgctcac
tcgcacccgcaaccgtgccaagtgctcaaacgaatcggccacacggttcggataggggct
ctgcacgttcagcctcgcttgctctctgctagggctgtcagcggctctgaggactggggc
aacgaaagagagttgacagaagagcagcagttggagttggaaagaccgtttaaaacaagt
gccagtgcgcctgggtatggaagccttaggactagagcgtccgttaacagtcagcggggc
gcaaacaggagtaaaagccaggcacgccaacgggaggagaacacctcgacggaaaatcgc
gtgttcgcaccccgagactcggttctgctcgccgtcgaggctctgaaccgggctgggttg
ctaccctacaatttatccttggagatcgtcatggctgttggatccacactcggagaactg
cccgcgttctccttttcctctacgggcaaccccgaaaacgaggacccgctgtccttcgtg
gagagtgtatgtcacactgtggttgtgcagggggtttctgccatgatcgcctttccacgg
aacagggacgagttcgtcaagttggaattcgtctcactcgcgcttcaggtacctgtagtc
agcgttgtgcagagggagttctcgcgccacagtaagaatcctctacatttccaaatggcg
atgcgaactgtggaggctccacaatcccagctgctctacaccctgctgatgatgaatggc
tggtgggacatcagcattctgctctgccaggaatggaatattagtgacttccttttcctc
atcaagaacaacacccgctttcacctgggcactcttgtcaacctgacaactattgcctta
acctcttcagtatcttcatctgcactatcaacctcagcggtggcatcagaccagcagcaa
actctcctgcgacagctggaggcccttagagaacactcatccacaacaggattggtgaca
tttgggtgcgacattcgcgaggtgcgacgtttgtggacgctggtcacgcggatgacgcgt
ccagagtttcactgggtcttgggggacagccagaatgtggctgagctgagaacagaaggg
ttacccatggggttactggcccatggggtcatgggatccccttctctggatcactacgtc
catgactcattagaactcgtggcacgtgccgtgggcagtgctgcccaggataatcctgcc
ttggcactcataccagggactaccaattgtatggataaacaacagagcaatggaagctcg
ggggaatacttggcaagatttgtagccaacacatcatttgagggccagagtggtttcata
tccagcaacagtcagagccagaatgtcatctcagaagcccatcactacatctggtccctc
cagctggatcccttaggccagccaacctggacccgcctgggacgctggcgcagggggaga
attctgatggacccagcagcctggccaaaccatccaggttctggaggaggtggcgattgg
cgccgacctccacggttgcacatgcgagtagtgacactggtggagcacccatttgtattt
acccgtgaagtggattcggatgggttatgtcctgccgggcagctgtgcctagacccgctt
accaatgaatcttcagttttggaaggacttttccagaatctcagaggaaccaatggatct
gttcccacagatctaaagaaatgctgctatggctactgcattgatctattggagaagctg
ggggaggacatgggctttactttcgatctctatattgttggtgatgggaaatacggaggg
tttaagaatggtcgttggacaggattggtgggtgatcttctgagtggtgctgcccacctg
gcagtgacatcttttagcattaattcagctaggagccaggtgattgacttcacctcacct
ttcttctccacgagcctaggaattctggtgcgtactcgtgatacagctgcacccatcggt
gcctttatgtggcctctacactggtccatgtggctcggcatctttgtttccctccatgtc
accgccatcttcctcactctgtatgagtggcacagtccatttggtatgacgccacgtgga
cgcaaccgcaaccgagtgttctccttctcctcagcacttaatgtgtgctatgccattctc
tttggaagaacagtggccatcaagccaccaaaatgctggactgggcgtctgctgatgaac
ctttgggccatcttctgtctattctgtctgtccacctatactgctaacctggctgctgta
atggttggggagaaaacttatgagcagttgtcgggaatccatgatccaaagttgcaccat
ccctctcagggattcagatttgctacagtgagagaaagcagtgcagaggactacgtcaag
aagagtttccccgagatgcacgagtacatgagaagatacaatgtcccggcaacgccagat
ggcatacatcatctcaaggccgaccctcagaaactggatgcattcatcatggacaaagca
ctgttggactatgaggtctccatagatgcagactgtaaaacactaacagtaggaaaacct
tttgcaattgaaggctatggcattggcctccctcagaactctccactcacgtccaacatc
tcagagcttattagtcagtacaagtcagatggcttcatggacatgctgcatgacaaatgg
tacaaggtcgttccctgcgggaagcgcagtttcgctgtgactgagacgctgcagatgggt
ataaagcatttttctggtctgtttgtgatgttgtgtgtgggtgtggctttatctttgctg
accaccatagcagaacacattgtgtacaagctggtgatcccaagggtcaaggagccacgc
ttcaaatactggctacacacaagccagagattacaccgggccctcaactcagtcttcaca
gatgacaaactaccgactattacaaagcctgaaaagaggtgcaatgagggaaacaaccag
tctgcgccttggaatcctgcagagtcgtcccactgcaacaggcgaaggatccttccacaa
gagatgcagaatgacctggaacgcccatcatcccaggatctccctcctccaccgccccct
tctcccctccctcatcctcactctctccctctgctggagaaacccctgcctatagtaact
acctctaatggtcgctctgacctgttagggaggggtttggaccaaggactggggccaggg
cagggcggttctgggcagtgccgtgctttgggagtgggcgactgcggtccaggtctgggt
gtgggacggaacccactggttcaagaactgtcagaactggagagtcaaatccttgtaatc
aagcagcagctgcagtcagccatgaggaggaagagagagcttgaacagtaccaatcagaa
aaccagcaagcaaaccagactgcacccagtcagcccacttcacaccaatctaaccagttt
gttcagtatacccagacccaccagcagactaaccaacacaaaaacacatgtccggagttc
tga
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