Oreochromis niloticus (Nile tilapia): 100698561
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Entry
100698561 CDS
T06104
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X2
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03020
RNA polymerase
onl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100698561 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100698561 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100698561 (polr3a)
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100698561 (polr3a)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
100698561 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
100698561
NCBI-ProteinID:
XP_005471423
Ensembl:
ENSONIG00000016129
UniProt:
A0A669E825
LinkDB
All DBs
Position
LG8:complement(12407704..12432793)
Genome browser
AA seq
1382 aa
AA seq
DB search
MRHPIVQSHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLAYGVLDHRMGTSEKDRP
CLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSRIMLTKEEKLQFMDY
LKRPNLAYLQKRGLKKKISDKCRKRTVCLNCSAFNGPVKKCGLLKIIHEKYKTTKKVVDA
FVSDFLQSFDIAIEHNKLVEPLLTRAQENLNPLVVLNLFRRIPEEDIPLLLMNPEAGKPA
DLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTGAKTQMIME
DWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGRTV
ISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANFIQNRHTQI
KRFLKYGNREKIAQELRFGDLVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTFRF
NECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIAAIQDFLTG
AYLLTLKDTFFDRSKACQIVASILVGKDERVRISLPRPAIIKPMALWTGKQIFSLILKPS
KECPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSKNNIFYILL
RDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDGYKKCDEYI
EALDTGKLQQQPGCTAEETLEALILKELSVIRDRAGSACLRELDKSNSPLIMALCGSKGS
FINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYSGLTPTEFF
FHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLD
PAAMEGKDEPLEFKRVLDNIRAVYTCPDEPALSQNELVLTADAIMKRADFLCCRDSFLEE
IKKFIKSVSERIKKTRDKYGINDNGTSEPKVLYQLDRVTPTQLEKFLETCRDKYMRAQME
PGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAH
LDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAET
VRYSICMSKLRVKPADIAVHGEAVVCVSPRENSKSSMYYVLQSLKGELPKVVVQGIPEVA
RAVIHIDEQSSKSKYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGIEAARSTII
NEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLASFEKTADHL
FDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPSPVKRPLLFDNPDFHLPL
IT
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcacccaatagttcaaagccacatctgcttcggcatgaaatctgctgagcagatg
cggcagcaggcccacatccaggtggtcagtaaaaatctctacagccaggacaccaaacac
actccgctggcctatggagtgttggaccaccgtatgggcaccagtgagaaagacagaccg
tgcctgacatgtgggaagaatctggcagattgtttaggacattatggctacctggatctt
gagctgccctgttttcatgttggttatttcaaagccacgataggaatcttacagatgatt
tgtaagacatgttcaaggataatgctgacgaaagaagagaagctgcagttcatggattac
ttgaaacggcctaacctggcctatctccagaaacgtgggctgaagaagaaaatctctgat
aaatgccgcaaaaggacagtctgtctaaattgttctgctttcaatggaccagtcaaaaag
tgtggcctacttaagatcatccatgagaagtataagacgaccaagaaagtggtggatgct
tttgtgtcagatttcttgcagtcctttgatattgccattgaacacaacaaactggttgaa
ccactgctgaccagagcacaggaaaacctgaatcctctggtcgtgctgaacctgttcagg
aggattcctgaagaggacatccctctgctgctgatgaaccccgaagcagggaaacccgca
gaccttatcatcacccgtctcctcgtgcctcctctttgcatccgaccgtctgttgtcagc
gaccttaagtctggcaccaatgaagacgacctcactatgaagctaacagagataatcttc
cttaatgatgtcattaaaaagcatcgtatgacaggagcaaaaacccagatgatcatggag
gactgggacttcctccagctgcagtgtgccctttacattaatagtgaactttctggtatc
cccctcaatatggcacctaaaaaatggactaggggctttgtgcagaggctcaagggaaag
caaggtcgattcagaggaaacctttctggcaaaagagtggacttctctggcagaactgtc
atttctccagacccaaacctgagaatcgatgaggtggctgtccctgtgcatgtggccaaa
atcctgacatacccagagagggtaaacaaagccaatctggagctaatgaggaaactggtc
cgtaatggtcctgatgttcaccctggagccaacttcatacagaacagacacactcagatt
aaaaggtttttaaaatatggaaaccgtgaaaagattgcccaggaactgaggtttggtgat
ttggtggaaaggcacctaatagatggagacatcgtcctcttcaatcgacagccttctctg
cacaaactcagcatcatggctcacattgccagggtcaaacctcacaggacatttcggttt
aatgagtgtgtgtgcacgccatacaacgctgactttgacggggacgaaatgaatctccat
ctacctcaaactgaagaagctaaagctgaggctcttatcctcatggggaccaaagctaat
cttgtcactccaagaaatggcgaaccccttattgctgctattcaggacttcctgacaggt
gcttacctcttgacgctgaaggacaccttctttgacagatcaaaagcctgccaaatagta
gcgtcaatccttgtgggtaaagatgaaagagttaggatctctctccctcgcccggccata
ataaagcccatggctctgtggacaggaaagcaaatcttcagcctaatcctgaagccaagt
aaggaatgtccagtcaatgccaacctacgcaccaagggcaaacagtactgcggcaaggga
gaggacctttgtcacaatgattcgtttgtggtgattcacaacagtgagctgatgtgtggt
agcatggataagggcaccttgggatctggctcgaagaataacattttctacatcctgctg
agggactggggacagctggaggctgccaacgccatgtctcgcttggcaagacttgctccc
gtgtatctctcaaacaggggtttctctattggaatcggggatgttacaccaggccagggc
ctgctgaaggctaagcaggacctgttggatgatggctacaagaaatgtgacgaatacatt
gaagctttggatacgggcaagttgcagcagcagccaggctgcacagcagaagaaaccctg
gaggctctcatcttgaaagagctgtccgtcatcagagaccgagctggtagtgcctgtcta
agggagctggacaagagcaacagccctctaattatggctctctgtgggtccaaaggatcc
ttcattaatatatctcagatgattgcctgtgtgggccagcaggccataagcggctctcgg
gtacctgatgggtttgagaatcgctccctgcctcactttgaaaaacactcaaaactgcct
gctgctaaagggttcgtggccgacagcttctattctggtttgacgcccacagagttcttc
ttccacaccatggctggtcgagagggtctggtggacactgcggtgaaaactgcagagact
gggtacatgcagaggcgtctggtgaagtctctggaggatttgtgctcacagtatgacctc
acagtacgcagttcaacaggcgacatcatccagttcatttatggtggtgatggcctggac
cccgctgcaatggaggggaaggatgagccactggagtttaagagagtcctggacaacatt
cgggcggtctacacgtgtccagatgaacctgcactgagtcaaaatgagctggtcctcact
gcagacgctatcatgaagagagctgacttcttatgctgtagagacagcttcttggaggag
ataaagaaattcattaagagcgtttcagaaaggatcaagaagactagagacaagtacggc
atcaatgacaatgggactagtgagccaaaggttctttatcagctggatcgtgtaactcct
acccagctggagaagtttcttgaaacctgcagagacaaatacatgagagctcagatggag
ccaggatcagcagttggggccctttgtgcccagagcattggagagccgggtactcaaatg
acactaaaaacctttcactttgctggtgttgcatcaatgaatatcactctaggagtgcct
cgcatcaaagaaatcatcaacgcctccaagaacatcagcactcctataatcacggctcat
ttggatgtggaagatgatgctgactttgccaggctggtgaaggggagaattgagaagact
cttctaggagagatttctgagtacatagaagaggttttccttccagatgactgtttcatc
ttggtgaagctgtcactggagagaataagactgctgcgactggaggtaaatgcagaaacg
gtgcgttactccatctgcatgtctaaactgcgagtcaaacctgcagacatcgctgtacac
ggggaggcggtggtgtgcgtgtctcctcgagagaacagcaaaagctccatgtactatgtg
ctgcagtcactaaaaggagaacttcccaaggtggtggttcaagggataccggaggttgcc
agagctgtcattcatattgacgaacagagcagcaagagtaagtacaaactcctggtggag
ggggacaacctgagagcggttatggcgacacatggcgtgaacggaagtaggaccacttca
aacaatacgtatgaggtcgagaagaccttgggcattgaggctgctagatccacaatcata
aatgagattcagtacaccatggtgaaccacggaatgagcattgaccgacgtcacgtcatg
cttcttgcagatctcatgtcctataagggtgagatcctgggaatcaccaggtttggttta
gcaaaaatgaaggagagtgtcctcatgctggcttcttttgagaagacagccgatcatctc
tttgatgctgcctattttggacagaaggactcagtttgtggtgtgtctgagtgtatcatc
atggggattccaatgaatattggaacaggactgtttaaactgctgcacaaggctgacaga
gacccctctccagtcaaaaggcctctcctctttgacaatccagacttccatttacctttg
atcacatag
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integrated database retrieval system
