Oreochromis niloticus (Nile tilapia): 100701720
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Entry
100701720 CDS
T06104
Symbol
trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100701720 (trpa1)
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100701720 (trpa1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Amdo_NSP_1-3
Motif
Other DBs
NCBI-GeneID:
100701720
NCBI-ProteinID:
XP_003443514
Ensembl:
ENSONIG00000014279
UniProt:
I3KA04
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All DBs
Position
LG9:complement(20077700..20120065)
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AA seq
1118 aa
AA seq
DB search
MNFSRDVARQNSCYTYVIEDDDPGLASRNIFELAEKGDLALLENLVKKSPEVLSEKDECG
AGPLHHAAAGGHITLIQFISTVTDAQDLNSCDEQGNVPLHWAVERNKAESCKALLDLGAN
PNILNTALLSPLHLAVSHGHSNLVGVLLSYSSTDCNLKGDLGNTPLMLACSLNNCEALSI
LLKHGAKLCQQNKLGHFAMHAAAFAGAKKAMEVILKAGEELGHSAVCHINYLDKTKSSPL
HLAVRGGNIETIRLCIATGAKVDQQQNDKSTPLHLACTQGALEVIKLMLSSVERVEDIIN
LTDGACQTPLHRATIFDHTELAEYLISLGADINSTDCKGNSPLLLATSCGAWKTVALLLS
KGANVNVRDKCGCNFLHLAILQPKGLKNLPEEVLQLNSVKALLSCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGQLGLACKSKDKKSALHFAAQYGRINTCHRLLESITDSRLLNEGDER
GLTPLHLASKEGHTKVVQLLLRKGALFHSDYKGWTCLHHAASEGYTQTMDILLSANLKLL
DKTDEDGNSALHIAARGGHVAAVRLLLARGAEIILNKNHTSFLHEALQNGRKDVVNAVID
SERCAEAVSLFNPESSQRCPILDMIEFLPETYKHLLDRCVRESDDDHNSPDYHIEYDFKW
LQAPIEVNKQTFNGNKVQPLAALNAMVQYNRIELLNHPVCKKYLAMKWVAYGSIAHVLNM
FLYLLGLLPLTHLIVTLRPSVNTSDTGEHDIIMVPVSFTEQPVSLSFCMVMVLVMNIYSI
GKEVVQISQQRWKYITDYSNQSDWISAIFSILFVVPLMINAEGSLHWQAGAIAVLNSWVG
FLLYLQRFEGVGIYVVMFGEIMKTLVRIVLLFFYLMLAFSLAFHALMLNQREFNSVPLSV
IQTFVMMVGELNYQNNFLDEYLNHRLPFGILTYFIFVVFVLFMPILLVNLMIGLAVGDIA
EVQRNAALKRIAMQIDLHTALEDKLPYWFMKRVDKNSITIYPNHRCSRHFLKKFFYGEEE
TNEVWNHLQAKSKACTLIENELKKQKTRMKEMSCLLEKQHCLVKLIIQKMEIASEADEYD
GPVNIRGSTWPALGQAKPSRETTSRWVPLMKAIEARRK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagcagggatgtggcacggcaaaacagttgttatacatatgtgatagaggat
gacgatccgggcctggcgtctcgaaatatatttgagttggctgagaagggtgacctagct
ctcctggagaacctagtgaagaagagcccagaggtcctcagtgaaaaagatgaatgtgga
gccggtccccttcatcacgctgccgcagggggccacatcaccctcattcaattcatctcc
actgtcacagatgcacaagacctgaacagctgtgatgagcagggcaatgtgccccttcac
tgggcagtggagaggaacaaggcagagagctgcaaggctcttttggacctgggggctaac
cccaacatcctcaacactgccctcctgtcccccctgcacttggctgtcagccatggacac
agcaacctggtgggggtgctgttgtcctacagcagtacagactgtaatctaaagggagac
cttggaaacaccccactgatgctggcttgttcccttaataactgtgaggctcttagcata
ttgttaaagcatggagcaaagctttgccaacagaacaagcttggccatttcgccatgcac
gctgctgccttcgcaggtgcgaagaaagccatggaagtgattctcaaggctggagaggag
ttaggccactcggctgtgtgccacatcaactatttagacaagaccaagagcagtcccctg
catctggctgtacgtggtgggaatatcgagaccatccgcctctgcattgctactggagcc
aaagttgaccagcaacagaacgacaagtctacgccgcttcatttggcctgcacccagggt
gctcttgaggtcatcaaactgatgctgtcttctgttgagcgagttgaagatatcatcaat
ctcactgatggtgcatgtcagacccctctacacagggcgacaatatttgatcacacggag
ctggcggagtacctaatttctctgggtgcagacattaacagcaccgactgcaagggaaac
tctcctttgctgctggctacgagctgtggagcatggaaaactgtggctctgctgctgtca
aaaggagcaaacgttaacgtgagagacaaatgtggctgtaactttcttcacctggccatt
ctgcagccaaaggggctgaaaaacctgccggaagaagtactgcagctcaacagtgtgaag
gcacttttaagctgtgaggataacgagggctgcaccccactccactacgcctgcagactg
ggaatccacgactcagtgaagaacatgctgggcctctcggggcaacttggcctcgcatgc
aagtccaaggacaagaagtctgccctgcactttgctgctcagtatggccgcatcaataca
tgtcaccgattattagagtccattactgactctcgtctgctaaatgaaggcgatgagcgt
ggcctgactccactccatttggcctcaaaagagggacacacaaaagtggtgcaactgttg
ctgcgcaaaggcgctctcttccacagtgattacaagggctggacttgtctgcaccacgct
gcttctgaaggatacacacaaacgatggatatcctactgtcagccaatctcaagctgctg
gataaaacagatgaggatgggaactcggcactccacatcgcagcgagaggtggacacgtg
gctgcggtcaggctgctgctggccaggggggcggagatcatcttaaacaagaaccacact
tcattcctccacgaggctttgcaaaatgggagaaaagacgtggtcaatgctgtaattgac
agtgaaaggtgtgctgaagctgtaagtctgttcaatcccgaaagtagtcagcgatgcccc
atactagacatgattgagtttctgcctgaaacttacaagcatcttttggaccgctgtgtg
agggaatccgatgatgaccacaacagccctgattaccacattgaatatgacttcaaatgg
ctccaagctccgattgaagtgaacaagcagactttcaatgggaataaggttcagccactg
gccgctctcaacgcaatggtgcagtacaaccgcatcgagctcctcaaccatcccgtctgc
aaaaagtatctggcaatgaagtgggttgcttatgggagcatagctcacgtgctcaacatg
tttctctatctgttgggcttgctgcccttaactcaccttatagtgactctgagaccctct
gtgaacactagtgacacgggcgagcacgatatcatcatggttcccgtatctttcacagag
caacctgtgtccttgtccttctgcatggtgatggtcttggttatgaatatctactcgata
ggaaaggaagtggtgcagatatcacagcagcgctggaaatacatcacggattattccaac
cagagcgactggatttcagccatcttctctatactgttcgtcgtccccctcatgatcaat
gcagagggttctttacactggcaagcaggggccatagcagttttaaattcctgggttgga
tttctcctttatctccagaggtttgagggagttggcatctatgttgtgatgttcggggag
attatgaagacgctggtccgtattgtattgctgttcttctacctgatgttggctttcagt
ttggccttccatgccctgatgctcaatcagagggagtttaacagcgtgccgctctctgtg
atacaaacctttgtgatgatggtcggggaactgaactaccagaacaacttcctggatgag
tatctgaatcatcgactaccttttggtatcctgacatacttcatttttgtggtctttgtt
ctgttcatgccaatcctgctcgtgaacctgatgattggtttagcagttggagacattgct
gaagttcaaagaaatgctgcgctgaaacggatagccatgcagattgatctccacaccgct
ctggaagataagctcccttactggtttatgaaacgagttgacaaaaactccattaccatc
tatcccaatcacaggtgttccaggcactttctgaagaaatttttctatggtgaagaggaa
accaatgaagtctggaatcatctgcaagccaaatcaaaggcatgcactttgatcgagaat
gagctcaaaaagcagaagaccagaatgaaagagatgtcgtgcctgctggagaagcagcac
tgcctcgtaaagctcatcatccagaaaatggagatcgcctctgaggctgacgaatatgac
ggccccgtgaacatcagagggagcacgtggcccgctttaggccaggctaaaccaagtaga
gagactacatctcggtgggtcccactgatgaaggccatcgaggccaggcgaaaatga
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integrated database retrieval system
