Oreochromis niloticus (Nile tilapia): 100703654
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Entry
100703654 CDS
T06104
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
onl03016
]
100703654 (trdmt1)
Enzymes [BR:
onl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
100703654 (trdmt1)
Transfer RNA biogenesis [BR:
onl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100703654 (trdmt1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
100703654
NCBI-ProteinID:
XP_003455789
Ensembl:
ENSONIG00000033090
UniProt:
A0A669C5N2
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Position
LG9:complement(31075698..31096587)
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AA seq
382 aa
AA seq
DB search
MDNLRVLELYSGIGGMHYALKESGIPAQVVTAIDINTTANQVYKHNFPDTALWNKTIEGI
TLDEFNKLSFDMILMSPPCQPFTRIGLQGDVTDPRTKSFLYILDLLPRLQRLPRFILLEN
VKGFETSSARARLVKTLTECGYTFQEIMISPISVGIPNSRLRYFLIAKISTEDLNTQAPS
KILDFFPHLAESDSSEHPTFLSPACQGASQPEEGTDVLFKLETTAEAQRKIRQNSNLSVK
QIKEFLEPQMEVNMEPYLLPPKTLLRYGLVLDIVQPTCRRSVCFTKGYGRYVQGTGSVLQ
CCMETKIESVFMGLDQCSEEEKLQRLLKLKLRYFSPREVANLMGFPQNLIFPEKIPTIQQ
YRLLGNSLNVVVVAKLLQLLVS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacaatttacgagtactcgagctgtatagtggcattggaggaatgcattatgcgtta
aaggagagtggcatacctgcccaagttgtaactgccattgacataaacaccacagcaaat
caagtctacaagcacaacttccccgacactgccctctggaacaagactattgagggcata
acgttagatgaattcaacaagttgtcttttgatatgatattgatgagtcctccttgccag
ccctttaccaggattggccttcaaggtgacgttactgaccctagaaccaagagcttcctt
tacatccttgatcttctgccaaggctgcagaggctaccacgtttcatcctgctggagaat
gtgaaaggctttgagacctcctctgccagagcacgtttggtgaaaacgctgacggaatgt
ggatatactttccaggaaatcatgatctcacccataagtgttgggatcccaaattcaaga
ctccgttattttctgattgcaaagatttccacagaagatttaaacacccaggcaccttca
aagattttagacttcttcccacatcttgctgagagcgattcttctgagcatcctacattt
ttgagtcctgcctgtcaaggtgccagccagccagaggaaggaactgatgtcctgtttaag
ctagagacaacagcagaagcccagaggaagattcgtcagaacagcaatttgtctgttaag
cagatcaaagaattcttggaaccacaaatggaagtaaacatggagccttatctccttcct
cctaaaacactgttgcgatatggtctagttttggacattgttcagcccacatgcaggagg
tctgtctgcttcactaaaggctatggccggtatgtgcagggaacaggttcagtattgcag
tgttgcatggaaaccaagattgaaagtgtctttatgggtctggaccagtgttctgaggag
gagaaacttcagcggctgttaaaactgaagcttcgttattttagtcccagagaagtagcc
aacctcatgggattccctcaaaatttaatctttccagaaaagatccctaccattcagcaa
tatagactgctgggaaacagcctcaatgttgttgtggtggcaaaacttctgcagctgttg
gtctcctaa
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