Oreochromis niloticus (Nile tilapia): 100704340
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Entry
100704340 CDS
T06104
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100704340 (hnf1a)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100704340 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100704340
NCBI-ProteinID:
XP_003445622
Ensembl:
ENSONIG00000011178
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All DBs
Position
LG12:8594335..8601645
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AA seq
559 aa
AA seq
DB search
MEGEERVEAAKAGPSRLTALQEQLIWALLESGLSREVLIQAMGELERNKASAGNERGERG
DGESSEEGEMDFPPPIFRELEKLPPEEASKLRTEVDHLLHEDPWHVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVKKQCEISQQFTNAKHGLATVKD
QGEDTKKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTSQTASSSNANLPPSPEHGVKYSQ
QIPCDTVSSARGSGGERVGRLMVSPVQLEPSHTLLETHNPKLVSSGGPLPPVSTLTSLHS
LSASPASSQSLIMASVPSVMSLGESSLLIGLASTQPQTVPVINNMGGGFTTLQPISFQQQ
LHASPQPPIPQQLQSHMAASPFMATMAQLPCHMYSKSDSPQYHPSSLLSQAMVIADSSSL
ASLTAVRQILTTDPDEQEDAPLQEDSLNMQPHSPAPVSSESLELYPSSQATESHQSHLLS
PSPTEISSYIPAQMVSTAQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggagagggttgaggcagccaaagcggggcctagccgtttgacggccctg
caggagcagctgatctgggccctgctggaatctggactgtcccgggaggttctgatccaa
gccatgggggaactggaacgaaacaaggcaagtgctggcaacgagaggggagaaagaggg
gatggagagagctcagaggagggagaaatggatttcccaccacctatattccgagaactg
gagaagctcccgccagaggaggcgtccaaactgaggactgaagtcgatcacctactgcat
gaggatccctggcatgttgcaaaaatggtaaaaagctacatgcagcagcataacctacct
cagcgggaggtggtggagtccacgggactcaaccagtctcacctctcccagcacctcaac
aaaggcacgcccatgaagaaccaaaaaagagctgctttgtacacctggtatgtcaagaag
cagtgcgagatcagccagcaatttaccaatgccaaacatgggcttgcaactgtgaaggac
caaggggaggacaccaagaaaggacggaggaacaggttcaagtggggtccagcatccctg
cagatcctcttccacgcctacgaacgacagaagaacccgagcaaggaggaaagagagggg
ctggtggaggagtgcaatagggcagaatgcctccagaggggcgtgtctccctcccagctt
gctggcctcggctctaacctggtcactgaagtccgagtgtacaactggttcgctaaccgt
cgtaaagaggaggctttccgccacaaactggccctcgacacgcctttcaccagtcagact
gcctcatcctccaacgccaaccttccacccagtcccgagcacggtgtgaaatacagccag
caaatcccatgcgacactgtgagctcagccagaggcagcggaggggagagagtggggcgt
ctcatggtgagtccagtccaactggagccaagccacacactcctcgagacccataacccc
aaactggtgtccagcggtgggccactacccccagtaagcactctaacctccctgcacagt
ctgtctgcctcacctgcatcctcacagagcctcatcatggcctcagtgcccagcgtcatg
agtctgggggagtcctcccttctcattggtttagcctccacgcaacctcagactgtgcct
gtcataaacaacatgggaggcggtttcacaaccttgcagcccatctcattccagcagcag
cttcacgcctctccccagccgccaataccacagcagcttcagagtcacatggctgccagt
ccgttcatggcaaccatggcacagctgccatgtcacatgtacagcaaatcggattcgccc
cagtaccacccgtccagtttgctctctcaagccatggtcatcgcagacagcagcagcctg
gccagcctcactgctgtcagacagattctgaccacagaccctgatgagcaggaagacgca
cctttacaggaagactctttaaacatgcaaccacactcacctgcaccagtttcgtccgag
agcctcgagctgtatccttcctctcaggcgacagaaagccatcaatctcacctcctctca
ccgtctccgacagaaatcagctcctacatccctgcacaaatggtttccacagcacagtaa
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