Oreochromis niloticus (Nile tilapia): 100706244
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Entry
100706244 CDS
T06104
Name
(RefSeq) laminin subunit beta-2 isoform X2
KO
K06243
laminin, beta 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04510
Focal adhesion
onl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100706244
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100706244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
EzrA
TPR_MLP1_2
Laminin_II
Motif
Other DBs
NCBI-GeneID:
100706244
NCBI-ProteinID:
XP_005478004
Ensembl:
ENSONIG00000001584
LinkDB
All DBs
Position
LG20:complement(31503448..31552142)
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AA seq
1797 aa
AA seq
DB search
MRASVAVLLCVLTVAVGQDPSQSHGCAHGSCYPATGDLLVGREKNLKASSTCGMRRKEPY
CIVSHLQDEKKCFDCDSRRPYNPLYNTISHRIENVITTFKPHRKKSWWQSENGKSDVFIQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQIYRYFAHDCAAVFPGVSEGPLRN
INDIICESRYSDIEPSTEGEVIYRVLDPAIRIQDPYSPTIQNQLKITNLRVNFTKLHTLG
DNLLDPRDEIKEKYYYAIYELVVRGNCFCYGHASECAPIAGIEDDVEGMVHGRCVCNHNT
KGLNCEQCDDFYNDHPWRPAEGRNTNACKKCNCNSHSTACHFDMAVYLATGNVSGGVCDD
CQHNTMGHHCETCKPFYYKDPVKDIRDPRVCIPCDCDPDGSQNGGMCDSHTDPSLGMVAG
QCRCKTNVEGPRCDRCKTGFFGLSTDNPHGCQPCQCDPRGTVSGSSQCDPVSGDCFCKRL
VTGRSCDQCLPEHWALSHDLNGCRDCECDIGGALDNHCSMESGQCRCRSHITGRQCTQVE
SGYFFMALDHLLYEAESATMGRGCVVEIREHQPGRPAMWTGLGFSRVPEGGTLEFRIGDI
PYSMEYDLLIRYEAQMPRDWEEVQVTVIRPGPIPTSSPCGNTIPDDDRLIVSLPAAARFM
VPPQPVCLERDVTYTLRFDFRRYQDANSILNGAANAVLLVDSIVLMPRHSAMEMFNAGDP
ASNTRRQTYERYRCHDGAKSVTRPLMSDTCAKLISSMSAIINDGALPCNCDPQGSISSLC
DVRGGQCRCRPNVMGRRCHQCAPGMYGFGPSGCTACGCSLEGSVTRLCDKFTGQCQCRPG
AFGQRCDRCQSGYWGFPSCRPCQCNGHADQCDQRTGACISCRDNTGGDKCERCANGYYGN
PILGTASGSQCRPCPCPDGPNSGRHFAVSCYQDSHNRQIICNCNQGYTGIVKRSGANIFN
RARCEECAPGYYGNPSQAGGRCQPCQCNNNIDMSDVNACDSQTGQCNKCLYNTEGPNCGI
CKSGFFGDASRRNCRKCTCNFLGTERSQCIEREDCVCQRATGQCQCLQNVVGLACDHCAP
NHWNLASGRGCEPCSCDPNNSVTSGCNEFSGQCQCRDGFGGKTCTDCQENFWGNPRTQCR
ACDCDWRGIETSQCNRVTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRIV
QDLAARTKGLAERAHGIQTTGLIGPYEKAFKDLEDKLAQAQDIVTARNATATAVTTLMEL
IEDLRAQIGETTDTLNSLEGELTIVQDSNSEASKELSALEREARELNLTSEQLHHQLDIL
KNSNFLGAYDSILGSYNRSRDAERRANESTTTKPSTVSQSADTRRRTERLIAAKKDDFNR
KNAANKRALGELNTKTQGLEMKKLNEKVCGTPGDAPCAESPCGGAGCRDDEGKRHCGGLN
CNGAVAVADNALERARHAERELNKAMKEVEGLFTKVAEAKTQAEEAKGKAKAALDKAATT
KNKVERSNNDLRDLIKQIRDFLTEEGADPDSIEAVANRVLELSIPASPIQIKHLADEIKE
RVHSLSNVDAILQQTQNDVRKAEQLLLDAKRARHHAEGVKTTAETVEQALVDAKNAQTSA
EKAIRKAKADIGETKKRLTEIESETSDGEMNLNDAVARLNTLRREINALKTKRASNSMAV
ARAEETATMARDKANEAKQILDGQLTDKYNEVQQRVDTKAKAVQDAKKRAERLRDEAKEL
LKDAQKKLQRLAELEKNYEENQKKLEGKARQLDGLEDKMKSILHDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcctcggttgcggtgctcctctgcgtcctgactgttgctgttggtcaggacccc
agtcaaagccacggctgtgcccatggcagctgttacccagcaactggggatttactggtt
ggacgagagaagaaccttaaagcctcatccacatgtggaatgagacggaaagagccttac
tgcattgtcagtcatttgcaggatgaaaagaagtgttttgactgtgactctcgacggcca
tataatccactgtacaacaccatcagtcaccggatagagaatgtcatcactaccttcaaa
cctcaccgcaagaagtcctggtggcagtctgagaatggaaagtcggatgtctttatccag
ctggatctggaagcagagtttcattttactcacttgattatgacgttcaagactttccgg
ccagcagccatgctgattgaacgttcagcagattttggtcgtacctggcagatctaccgc
tactttgcccatgactgtgctgctgtctttcctggagtctctgagggtcctctgcgtaac
ataaatgacatcatatgtgagtcacgctactctgatattgagccatcgacagaaggagag
gtcatctacagagtgttggatccagccatcaggattcaggatccatacagcccgactata
cagaaccagctaaagatcaccaacttgagagtgaatttcaccaagcttcacacgctgggg
gacaacctgctggaccccagagatgaaatcaaagagaaatactactatgcaatatacgag
cttgtcgttcgtggaaactgcttttgttatggccatgcctcagagtgtgcccccattgct
ggcatcgaggatgatgtagaagggatggttcacggcaggtgtgtctgtaaccataacact
aagggtttgaactgtgagcagtgcgatgacttttacaacgaccacccctggaggccagct
gaaggacgtaataccaacgcttgcaagaagtgtaactgtaacagccactcgacagcctgt
cactttgacatggcggtgtatttggctacgggaaatgtcagcggaggagtgtgtgatgac
tgtcagcacaacaccatgggacaccactgtgagacatgcaaacctttctactacaaagac
cctgtcaaggatataagagacccaagagtttgcataccatgtgactgtgaccccgacggt
tcacagaatggggggatgtgcgacagccacacggacccgtctctcggcatggtggcaggt
cagtgccggtgcaagactaatgtggaggggccgcgctgtgacaggtgtaagacaggcttc
tttggtctgagcacggacaatcctcacggctgccagccttgtcagtgtgaccccagagga
acagtgtcaggtagctcccagtgtgacccagtcagcggagactgcttctgcaagcgtctt
gtcactggacgcagctgtgaccagtgtctgccagaacactgggcactgagccatgacctg
aacggctgcagagactgcgagtgtgacattggaggagcactggacaaccactgctccatg
gagagcgggcagtgccgctgccgcagtcacataacagggcgccagtgtacacaggtggag
tctggatatttctttatggctctggatcaccttctttatgaggctgagagcgccacaatg
ggacggggctgtgtggtggagatcagggagcatcagcctggccgacccgccatgtggaca
ggtcttgggttttcccgggtacctgaaggtggaacactggagttccgtattggtgacatt
ccctactccatggaatatgatttgctcatccgctatgaggcgcagatgcccagggactgg
gaggaggtgcaggtaacggtgatccgtccagggccaattcctaccagcagcccttgtgga
aacaccatccccgacgatgacaggctcattgtctctctgcctgctgcagcaaggttcatg
gtgcctcctcagcctgtgtgtctggagagagacgtgacttacaccctccgcttcgacttc
agacgctatcaggatgccaacagtatcctcaatggagcagccaacgccgtcctcctcgtg
gactctattgtgttgatgccacgccactccgccatggagatgttcaatgcaggagatcca
gcctccaacaccaggaggcagacctatgagcggtatcgctgtcacgacggggcaaagagt
gtgacgcgcccactgatgagtgacacctgtgccaagctgataagcagcatgtccgctatc
ataaatgacggagctctgccttgtaattgtgaccctcaggggtccatcagctctctgtgt
gatgtccggggaggccagtgtcgctgcagacccaatgtgatgggtcgacgttgtcaccag
tgtgctccaggaatgtatggctttgggccctcaggctgcacagcctgcggttgcagtttg
gaaggctccgtgacgcgactttgtgacaagtttaccggtcagtgtcagtgccgtccagga
gcattcggtcagcgctgtgacagatgccagtcgggttactggggcttcccgagctgccga
ccctgccagtgtaacgggcatgcagaccagtgtgaccagaggaccggcgcctgcatcagc
tgcagagataatactggaggggacaagtgtgagaggtgtgccaatggttactatggcaat
ccaattttgggcacagcatccggcagtcagtgtcgtccgtgcccctgcccagatggtccc
aacagcggacgccactttgctgtgtcttgttatcaggacagtcataacagacaaatcatc
tgcaactgcaaccaaggatacacagggattgttaaacgctccggggcgaacatttttaat
cgtgcccgatgtgaggaatgtgccccgggttattacggtaacccctcccaggcaggaggg
cgctgccagccgtgccagtgtaacaacaacatagacatgtcagacgtgaatgcctgtgac
agtcagaccggacagtgtaacaagtgcctttacaacactgaaggtcccaactgtggcatc
tgcaagagcggctttttcggggatgcttcccgacgaaactgcaggaagtgcacatgtaac
ttcctgggtactgaacgcagccagtgtattgagcgcgaggactgcgtgtgccagcgggcc
acaggccagtgccagtgtctgcaaaatgtcgtaggtctggcgtgcgaccactgtgccccc
aaccactggaacctggccagtgggaggggctgtgaaccatgcagctgtgatcctaacaac
tctgttacctctgggtgtaatgagttctctggtcagtgtcagtgccgtgatggctttgga
gggaagacgtgcacagactgtcaggagaacttctggggaaaccccaggacacagtgcaga
gcatgtgactgtgactggcgtgggattgagacctctcagtgcaaccgagtgacaggccac
tgtgtttgtcagcagggagtgtcgggtgtccgctgtgaccagtgtgccagaggcttttct
ggccagttccccaactgccagccctgtcaccagtgttttggggactgggatcgcattgtg
caggacttggcagcacgcacaaagggtcttgcagagcgtgcccatgggattcagaccact
gggcttattggaccctatgagaaagcctttaaagacctggaggacaaactggcacaagct
caggacattgtcactgcacgcaatgccactgctacagctgtcactaccctaatggagctt
attgaagatcttagagcacagattggtgagaccactgataccttaaacagtcttgaggga
gaattaaccatcgtgcaggacagcaactcagaggcaagcaaggagctgagtgctttggaa
agagaggccagagagcttaacctcacttcagagcagctacaccaccagctggatatcctt
aaaaactccaacttcttaggggcgtatgacagcatccttggctcctacaacaggtctcgt
gatgcagagaggcgggctaatgaatcaaccaccaccaagcccagtacagttagccagtct
gcagacacacgccgccgcactgaacgcctcattgctgcaaagaaagacgacttcaaccgt
aaaaatgctgcaaacaagcgtgctctgggagagctcaacaccaaaacacagggcttagaa
atgaagaagctcaacgagaaggtctgtggcaccccaggtgatgccccctgtgcagaaagc
ccctgtggtggtgcaggttgccgtgatgatgaggggaagcgtcattgtggaggcctgaac
tgtaatggtgctgtggcagtagctgacaatgccctggagagagccagacatgcagagagg
gagctgaacaaagccatgaaggaagtggagggactctttaccaaggtggcagaggctaaa
acccaggcagaggaggctaagggtaaagccaaggcagctctggataaagccgccactacc
aagaacaaagtggagcgttccaacaatgacctgagagacctcatcaaacagatcagggac
tttctcacggaggaaggcgcagacccagacagtattgaggcagtggcaaaccgtgtgttg
gagctctccattcctgcttcacccattcagatcaagcatctcgctgatgaaatcaaggag
cgggtccacagcctttcaaatgtggatgccatcttgcagcagacgcagaatgatgtccgc
aaggccgaacaactgctgctggatgccaaaagggcgaggcatcatgctgagggggtgaag
acgacagcagagacagtagaacaggccttggtggatgctaagaatgcccagacttcagca
gagaaagccataagaaaagccaaagctgacattggggagactaaaaaacggctgacagag
attgagtcagaaacatctgatggtgagatgaaccttaatgatgccgtggcccgcctcaac
acactgagacgtgagatcaatgccttgaagaccaaacgtgccagcaacagcatggcagtt
gcccgagctgaagagacagctaccatggcacgagacaaggcaaatgaagccaagcagatt
ctggatggtcagttgacagataaatacaatgaggtacagcagcgggttgacactaaagcc
aaggctgtgcaggatgccaagaaaagggcagagagactcagagatgaagccaaggaactt
ctgaaagatgcccagaaaaagctacagagacttgcagagttggaaaaaaactatgaggaa
aaccagaagaaactggaggggaaggctcgtcagctagacggtttggaggacaagatgaaa
agcatcctccacgacatcaacaaacagatccagatctacaacacgtgtcagtaa
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integrated database retrieval system
