Oreochromis niloticus (Nile tilapia): 100706507
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Entry
100706507 CDS
T06104
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04510
Focal adhesion
onl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100706507
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100706507
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
CheZ
F5_F8_type_C
DUF2573
Trimer_CC
Prominin
DUF948
DUF1664
TMP_3
Motif
Other DBs
NCBI-GeneID:
100706507
NCBI-ProteinID:
XP_003457017
Ensembl:
ENSONIG00000001597
LinkDB
All DBs
Position
LG20:complement(31554408..31607275)
Genome browser
AA seq
1855 aa
AA seq
DB search
MAVQRDSLLSIMMPIMNVHLSLLMLAVCVFGQELPSSPHGCTEGSCYPATGNLLIGRAVN
LTATSTCGLNGPERYCIVSHLQQPEKCFECNSQHPYDPNVHSNSHRIENVIYLTDSNGVN
TWWQSVHGQESVSIRLNLEAEFHFTHLIMKFKTFRPAALVIERSADFGRTWRPYRYYASN
CTRTFPSIPANGLHHVNDIICEERYSDIEPSTNGEVIYKVLDPAIPVKDPYRLDIQELLR
ITNLRINFTKLNTLGDDLLDRRPEVLQKYYYAIYELVVRGSCFCYGHASECAPVPGIDAR
EIGMIHGRCVCKHNTEGLNCERCRNFHNDLPWRPAEAENPHTCRECNCNGHSDQCHFDMA
VYMATGNVSGGVCDDCLHNTMGRNCETCKPFYYQDPNRDIRDPRVCVACDCDPVGSLEGG
VCDTHTDFEMGMIAGQCRCKVNVKGTRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIIVMG
APCDQISGDCSCKRYVTGRYCNQCLPEYWGLSNDLAGCRPCDCDFGGAFNNRCMMETGQC
DCRRHLIGRQCSDVQPGYFCAPLDFYKYEAEDATGHSPADPVLPGQVRQQATNDCVQHLS
NQLRRHRRHRNIPKSQQHQAALRRIRQLQQTPDVRTVHRERTLSHMVTWTGPGFSRVKDG
AGLVFTIDNIPYAMEYDIMIRYEPESTENWEAVVSITSVELPSSLRCGNLLPTEQLYTVT
LPHHNRYIQMPRPFCFEPSNRYVVTVRFQRHGATHRHLTAFILIDSLVLIPKYTELPGFQ
GNTPESEQRQEEMIRYMCLDSFMITPMPALAEMCSKLICSISSIIHDGALPCECDPQGSL
SGECDVVGGQCRCKPNVIGRRCDQCAPGTYGFGVSGCTACDCHSDGSLSHQCDPVTGQCQ
CRQGATGRQCSDCQPGQWGFPSCTPCQCNGHADLCDPRTGECRGCRDFTAGHLCERCMDT
FFGNPALGSGQHCRPCPCPNNPNSDNFNALSCQVDHTSDQIMCNCKQGYMGLRCDQCAPG
YYGNPEQPGGQCFPCECNGNIDTQDPESCDPRTGECIKCLYHTDGPSCAQCQNGYYGNAL
AHDCRRCTCVTAGTLQSACSDGHCDCDRQTGACPCREHVVGHNCDQCAPNYWNFGQDRGC
EPCNCNSQHALGSHCNMFTGQCHCHSGFGGKQCTECELFHWGDPREQCHECNCNPEGAEI
SQCDRLTGACECREGATGLQCNQCARGFTGIFPKCIQCHPCFQLWDDAVCQIRRDLDHIQ
SRVQEILKGGIIPGAGDARIKELEGKLKQVKDLIITQDRDRVYQLIGQSIDDLRAEIALT
DGRLMAMGQELNTTAETDRTLRHTLDNMEKELRDLNTTVADKQKLLNELFSSGFADQFEK
VKQYYQESLEAEMKCNASVFGPMSPLEESNKIRARTENLLDETENDINRNVAAHNKSLND
LQKQAHDLHKQVNHLSDQVCGGHSNSSVNGSCPDSRCGGAGCHDDQGNRVCGGVGCSGTV
GTSVAALNDARNVTDSLNTASKELQKVSKKLQDIAAMTQNLKNQTINTLEKANKLSKELK
ESNKNLTEFIEKIKNFLTEEGADPESIEKVAQEVLSITLPLNRTVLDKMIAQIKESLSNI
GNIEGIVNQTTLHTTKVKELLDAAKQAKRRAEEVKDMTNITKEALKASGKAIEKAQAALK
EAHNNLNSTRNATAEVEGKLVRLDAKQMDVMMRLMNLSKEVEALKNKTEQNRQMAIEAKA
LADNATDLTSSLEQSLNDTKKQYRELQMKIESLGGVSGGLKDINQRVKDLKEDAEELLKN
ATSGITQLDQLEKMFKNNEMRMEKQRIELDELKDNATSVRDEIRDRVQKYNTCLR
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaaagagacagcctgttgtccatcatgatgcccatcatgaatgttcatctg
agtctcctcatgctggctgtctgtgtatttggacaagagctcccatcaagccctcatggc
tgcactgagggaagctgttaccctgcaacaggaaacctcctgattggacgtgctgtcaat
ctaacggccacctctacttgcggccttaatggaccagagcgatattgtattgtcagtcat
ctgcagcaaccagagaagtgttttgagtgcaactcccagcatccctacgacccgaatgta
cactcaaacagtcaccgcattgaaaatgtgatctacctcacagacagcaacggagtcaac
acctggtggcaatctgtccatggccaggagagtgtcagcatcagactgaacctggaggct
gaattccactttacacatctcatcatgaagtttaagactttccgacctgcagctctggtc
attgagcgttcagctgactttggccgaacatggcgtccctaccgctactatgcctccaac
tgtaccagaaccttccccagcattcctgccaatggcttgcaccatgtcaatgacatcatc
tgtgaggaacgctactctgacatcgaaccctccactaatggagaggttatttataaagtg
ctggatcctgccattccagtgaaagacccctacaggttagatattcaagaacttttgcgc
atcaccaacctgcgcattaacttcacaaagctcaacactctgggagatgaccttctggac
cgacgccctgaagtcctgcagaaatattactatgctatctatgagctggtagtgcgaggg
agctgtttttgttatggacatgcttcagagtgcgctcctgtgccggggattgacgccagg
gagatcggcatgatccatggtcgctgtgtgtgcaaacacaacacagaaggcctgaactgc
gagcgctgccgaaacttccacaatgacctgccgtggagaccagcggaggcagagaaccct
cacacctgcagagagtgtaactgtaatggccactcagaccagtgccactttgacatggca
gtgtatatggcaacgggtaatgttagtggaggagtttgtgatgactgtctgcacaacact
atgggacgcaactgtgagacgtgtaaacctttctactaccaagatccaaacagagatatt
agagatccacgggtttgtgtcgcctgtgactgtgacccagtggggtcattggagggaggc
gtgtgtgatacccacaccgactttgaaatgggaatgattgcgggacagtgtcgctgcaaa
gtcaacgtgaaggggacgcgctgtgatgactgcaaggagggttattatggactcagccag
aatgaccctttgggttgccaaccttgcaactgtgaccctcgtggcatcattgtgatggga
gctccttgtgatcagatcagtggggactgctcctgtaaaagatatgtcaccggccgctac
tgcaaccagtgtctgcctgaatactggggcctcagtaatgacctggcaggctgcagacct
tgtgactgtgactttggaggagccttcaacaacaggtgcatgatggaaaccggccagtgt
gactgcaggaggcacctaattggccggcaatgctctgatgtgcagcctgggtatttctgt
gctccactggacttctacaagtatgaggctgaagatgccaccggacactcccctgctgac
cccgtactgccgggccaagttcgccaacaggcaactaatgactgtgttcagcacctcagc
aaccagctcaggaggcaccggcggcaccgtaacattcccaagtcgcagcaacatcaggca
gcactgagacgtattcggcagcttcaacaaacaccggatgtgaggaccgttcatagagaa
cgcactctcagccatatggtgacatggacaggacctggtttttcccgcgttaaagatggc
gctggtctggttttcaccattgataacataccctatgccatggagtatgacatcatgatc
cgctatgaacctgagtctacagagaactgggaggctgttgttagtattacatctgtagaa
ttgccctccagtctccggtgtggaaacctcctaccaactgaacagctctacactgtcact
ttgccacaccacaacagatacatccagatgcccagaccattttgttttgagcccagcaat
cgttacgtggttacagtcaggttccagcgtcatggcgccacacacagacatctcactgcc
ttcattcttattgactcgctggtattgatccctaaatacacggagcttcctgggtttcaa
ggtaacacaccagagtcagagcagcgtcaggaggagatgatccgctacatgtgtcttgat
tcctttatgatcactccaatgcctgcactggctgagatgtgctccaaactcatctgcagt
atttcttccattattcacgacggtgccctaccctgtgagtgtgaccctcagggctccctc
agcggtgagtgtgacgtggtgggaggtcagtgccgttgtaaacccaacgtgattgggagg
cgctgtgaccagtgtgccccggggacctacggctttggtgtgagcggctgcactgcctgt
gactgccactccgacggctcattgagccaccagtgtgacccagttacaggccagtgtcag
tgcagacaaggagccaccgggcggcagtgctctgactgccagccgggccagtggggcttc
cccagctgcaccccctgtcagtgtaatggccatgcagacctctgcgatccccgcacggga
gaatgcagaggctgcagggacttcacagcaggacatctctgtgagcgttgtatggacaca
ttctttggaaacccagcacttggatcagggcagcactgccggccctgcccctgcccaaat
aaccccaactccgataacttcaatgcgttatcttgtcaggttgaccacacctctgatcag
atcatgtgtaactgcaaacagggctacatgggtcttcggtgtgaccagtgtgcccctggt
tactatggcaaccctgagcagcctggcggacagtgcttcccatgtgagtgcaacggcaac
atagacacccaggatcctgagtcatgtgaccccaggactggcgagtgcatcaagtgcctg
taccacactgatggcccgtcttgcgcccagtgtcaaaacggttactatggcaacgctttg
gcccatgattgcagacgatgtacctgtgtgactgctggtaccctccagtctgcttgcagc
gatggacactgtgactgtgatcggcagactggagcttgtccctgcagggagcatgtggta
ggccataactgtgaccagtgtgcacctaactactggaacttcggtcaggatcggggctgt
gagccgtgtaactgcaactcgcagcatgctctgggaagtcactgcaacatgttcacaggc
cagtgtcactgtcattcaggctttggaggtaaacaatgcaccgagtgtgagctgttccac
tggggagatccacgggagcagtgccacgaatgcaactgtaacccagagggagcagagatt
tcccagtgtgacagattaacgggtgcgtgtgaatgccgggaaggagccactggactgcag
tgcaaccagtgcgctcgtggtttcaccggcatcttcccaaaatgcatccagtgtcacccg
tgcttccagctctgggatgacgccgtgtgccagattagaagggacctggatcacatccag
tccagagtgcaggagatcctgaagggtggtatcataccgggagctggggatgcacgcatc
aaagagctggaggggaagctgaagcaggtgaaggatctgatcattacgcaggacagggac
agggtctaccagctcattggccagagcattgatgacctcagggctgagattgccctcact
gatgggcgtctgatggccatgggccaagagttgaatacgacagcagaaacagacaggaca
ctccgacacacgctggataacatggaaaaagagctgcgggacctcaacaccactgtggct
gacaaacagaagctgctgaatgaactgttcagctcaggctttgcagatcagtttgagaaa
gtgaagcagtactatcaggaatcgctggaggctgagatgaaatgcaacgcttcggtgttt
ggtcctatgagtcctttggaagagtcaaataagatcagagcacgcacagaaaacctgctg
gatgaaactgaaaacgacattaaccgtaatgtggctgctcacaacaaatcactcaacgac
ctacaaaaacaagctcacgacctccataaacaggtcaatcacctgagcgaccaggtgtgt
ggtggtcacagcaatagcagcgtcaatggcagttgcccagacagtcggtgtggtggcgcc
ggctgccatgacgatcagggaaaccgtgtatgtggaggagtgggatgcagcgggactgtg
ggcacatctgtagctgcgctgaatgacgccaggaacgttacagacagtctgaacactgcc
agtaaggagctgcagaaagtctccaaaaagctccaggacatagctgctatgacacaaaac
ctgaagaaccagacgataaacacgctggaaaaagccaacaagttgagcaaggagcttaaa
gaaagcaataagaacctgacagagttcattgagaagatcaaaaactttctcactgaggag
ggagccgacccagagagcatagagaaagtggctcaggaggtcttgtcgatcacactgcca
ctgaacaggaccgttctggacaaaatgatcgcgcagataaaggaaagtctttccaacatc
ggcaatattgaggggattgtcaatcaaaccacactgcacaccactaaagtcaaggagctt
cttgacgcagctaaacaggccaagagacgagcagaggaagtgaaagacatgaccaatatt
accaaggaggcattaaaagcgtctggaaaggccatagagaaagcacaggctgccctgaaa
gaagcccacaacaacctgaacagcacaagaaacgctactgctgaggtggagggaaagctg
gtgaggttagacgccaagcagatggatgtcatgatgcgtttaatgaacctttccaaggag
gtggaagctctgaagaacaagacggagcagaacagacagatggcaatcgaggctaaagca
ctggccgacaatgccactgacctaacatcttcactggagcagagcctcaacgacacaaag
aaacagtatcgtgagctgcagatgaagatcgagtctcttggtggggtgtctggaggtctg
aaggacatcaaccagagggtcaaagatctcaaagaggatgcagaagaattactcaagaat
gccaccagtggtataacacaactggaccaacttgagaaaatgttcaaaaacaacgagatg
aggatggagaagcagcgcattgagttggacgagctgaaagacaacgcaactagtgtgcgg
gacgagatccgggatcgagtgcagaagtacaacacctgtctgcgatga
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