Oreochromis niloticus (Nile tilapia): 100712216
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Entry
100712216 CDS
T06104
Symbol
grin3b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04020
Calcium signaling pathway
onl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100712216 (grin3b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100712216 (grin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100712216 (grin3b)
Ion channels [BR:
onl04040
]
Ligand-gated channels
Glutamate (ionotropic)
100712216 (grin3b)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
100712216
NCBI-ProteinID:
XP_013130549
Ensembl:
ENSONIG00000004558
UniProt:
I3JA48
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All DBs
Position
LG23:complement(36077197..36130419)
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AA seq
1224 aa
AA seq
DB search
MSLTSSSSSSCLRTLRAFLLLQLLLVPPCLLHPQPCRLLAQIGHSVRVGALLPAQRAARV
QVQAALSRAAAAVSRDRELERDPERVNFLPYNLSLELVPRQLTAADPESLLRCACQGVVV
QGVSAVLAFPQSREELLQVDLTASSLEIPFISVLQHGEPLRTQNRFHLQMATGVPESGLS
DLLLTVLQRSGWREGTAVLCRGWEEARGLLQLLDHHSSASWEGGRRVTWHLRALLNLTQS
AHDDTQIHDFLSRHFRQNQASPASVLLFGADPQCAAAVLRSAQDLGLTLPMVHWVLGQPL
SPDVLHTIGLPLGLLAYGEVERKPLDYYVRDALQLITRAVAAATAVRPDLALIQNTMNCY
DKPNKHEVLTSGQYLSRFLSNTSFSGLTGPIRVHQNWSEVITLQRFHIWSLRRDALGQPT
WVTVGSWEDGSLQVEDQQVWQGPKPHHRMDGMGGRTRGQWRAGLPVAGSRVRVVTLVEHP
FVFTRDVDDEGSCPAGQFCLDAAANSSETLERYFREVAGGNSSSLPRDYTKCCYGYCIDL
LEKLAEDLGFEFDLYIVGDGKYGAWKGGRWTGLVGDLLNGLADMAVTSFSINSARSRVID
FTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFLALHITALFLTLYEWKSPYGM
TPHGRNRVRVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTAN
LAAVMVGEKTFEEVSGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEP
TTPEGVATLKTDPPQLDAFIMDKALLDYEVSIDADCKLATVGKPFAIEGYGIGLPQNSPL
TSNVSEFISRYKSDGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLFVLLCVGVS
GALLTLAGEHGFYQLVLPHIRRRQNLKYWLHTSQKIHRALNMTYEDVKRQRAEKEKSCNL
HKSQPSPAPPAPGASAKWNNETSKDAAAAAAAAAAAKDARDFKRVHFNLETLNTRRLLAR
LAVSEAKGGSAMAEREGPAKPKVGPNSSLCENGGPAASFTNLLLTLPSSSSSARPNASAP
SPSAVALPPPATSTPAPVTIAPPASDAPPRAAVAPPRPGELEELEEEIEQMREKLRTALA
RRAEIQTTLTKPTVTVTSTPSSVTTTTIMATPTTTGATPIPIPTITPVTTLPSNMKCVTT
MTDPPHKVLSKVRPLHSRLASQRR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcacctcctcctcctcctcctcctgcctccggactctccgagccttcctcctc
ctgcagctcctcctcgtaccgccgtgcctcctccacccgcagccgtgccgcctcctggcg
cagatcggtcactccgtgcgcgtcggtgcgctcctgccggcgcagcgggcggcgcgcgtg
caggtccaggcggcgctgagccgcgcggcggccgcggtgagccgggaccgggagctggag
cgggacccggagcgtgtgaacttcctgccctacaacctgagcctggagctcgtgccccgg
cagctgaccgccgcggacccggagtcgctgctccgctgcgcgtgccagggcgtggtggtg
cagggagtgtccgccgtgctcgctttcccgcagagccgcgaggagctgctacaggtggac
ctcaccgcctcctccctggagatccccttcatcagcgtcctccagcacggagagccgctc
cgcacgcagaaccggttccacctgcagatggcgacgggtgttccagagtcgggtctgtct
gatctgctgctgacggttctgcagcggtccggttggcgggaggggaccgccgtgctgtgt
cggggctgggaggaggctcggggtcttctgcagctcctagaccatcacagcagtgcatcg
tgggaaggcggcaggagggtcacctggcacttgcgagccttgctgaacctgacgcagtcg
gctcacgatgacacgcagatccacgacttcctgtctcgacacttccgacagaaccaagcc
tcaccagcctcagtgctactgttcggggccgacccgcagtgcgcggcagctgtgctgcgc
agcgcccaggacctggggctgacgttacccatggtacactgggtgctgggtcagccgctc
agccccgacgtgctgcacaccatcgggctgccgcttggcctactggcctacggtgaggtg
gaacggaaaccgcttgactactacgttagagacgccctgcagctcatcaccagggctgtt
gctgcggcgactgcggtgaggccggacctggctctgatccagaatacgatgaactgctac
gacaaacccaacaagcacgaggtgctgacctcaggacagtacctgtccaggtttttgtca
aacacatctttctctggactcaccggtcccatccgggtccaccagaactggtctgaggtt
ataactctgcagcggttccatatctggagtctgcggcgggacgcactgggtcaacccacc
tgggtgacagtaggcagctgggaggatggctcgctgcaggtggaggaccagcaagtgtgg
cagggacccaagcctcaccacaggatggatgggatgggtgggaggaccaggggccagtgg
agggcagggttgccggtggcagggagtcgggtccgggtggtaaccctggtggaacatccc
ttcgtgttcacgcgggacgtggacgacgagggcagctgcccggccggtcaattctgcctg
gatgctgccgctaacagctcagagaccctggagagatacttcagggaagtggcaggtgga
aacagcagctcgctgcccagagactacaccaagtgctgctatggatattgtatagacctt
ctggagaagctggctgaggacctaggctttgagtttgacctttacatcgtcggagacgga
aagtatggagcttggaagggaggccgctggaccgggctggtgggagatctcctgaatggt
ctggcagacatggctgtcacctcatttagcataaattctgcccgtagccgggtgattgac
ttcacttcgcccttcttctccaccagcctgggcatcctggtgcgcagtaaggacacggcg
gcccccattggggccttcatgtggcccctgcactggtccatgtgggtgggcatcttcctg
gcgctgcacatcactgcacttttcctcacgctctatgagtggaagagtccttatgggatg
acacctcatgggcgcaaccgggtgagggtattctcttactcatcggctctcaacctgtgc
tacgccatcctgttcgggcgcaccgtctcctctaagaccccaaagtgctggacaggccgc
ttcctgatgaacctgtgggccatcttctgtctgctggtgctgtccagctacaccgctaac
cttgctgctgtcatggtgggagagaagacctttgaggaggtctcagggatccatgatgcc
aagctgcatcatccgtcacagggttttcgttttgggacagtgagggaaagcagtgcggag
gattacatgaagaagagttttccagaaatgcatgagtacatgagacgcttcaacgagcca
accacacctgaaggagttgccaccctcaagacagatcctcctcagctcgatgcattcatc
atggacaaagctctgttggattacgaagtctccatcgatgctgactgcaaactggcgaca
gtcgggaaaccgtttgccattgaaggttacggtatcggcctccctcagaattctcctctg
acatccaatgtctccgagttcatcagcaggtacaaatccgatggatacatggacctgctg
cacgacaagtggtacaaagtggttccgtgtgggaaccgcgtgttcgccgttactgagact
cttcagatgggcatcagtcacttttccggactcttcgtgttgctatgcgtcggcgtgagc
ggcgctttgctgactctggcaggcgaacatggtttttaccaactcgtcctgccacacatc
cgccgccgtcagaacctaaagtactggctgcacacctcacagaaaatccaccgagctctg
aacatgacgtacgaggacgtgaagaggcagcgagctgagaaagagaagagctgtaacctg
cacaagtctcagccctctccggcccctccagctccgggagcttcagccaagtggaacaac
gaaacgagcaaggacgccgctgccgccgctgctgctgctgctgctgccaaagatgccaga
gacttcaaaagagtccacttcaacctggagacgctcaacacccgccgtctgcttgctcgt
cttgcagtctctgaagccaagggaggcagcgccatggctgagagggagggaccggccaag
ccgaaggtggggccaaacagcagcctgtgtgagaatggaggaccggcggcttcgttcacc
aacctactgctcacgctcccctcctcatcctcctctgcaagacccaatgcttctgcacca
tccccctcagctgtggcacttcctccgcctgctacttccacccctgcccccgttaccata
gccccgcctgcctcagatgccccaccccgtgctgctgtggctccgccccggcctggcgag
ctggaggagctggaggaggagatcgaacagatgagggagaagttacggacagctctggca
aggagagctgagattcagacgactctaaccaaacccactgtcacagtgacaagcacccca
tcatccgttaccacgacaactattatggcaaccccaacaacgacaggagccacgcccatt
cccatacccaccattaccccagtaacaacccttccttccaacatgaaatgcgtaacgacc
atgaccgacccgcctcacaaagtcctatctaaagtccggcccctccacagcagactggcc
agtcagaggaggtga
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